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    Jkampl JNK1/MAPK8 associated membrane protein like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 500204, updated on 29-Feb-2024

    Summary

    Official Symbol
    Jkamplprovided by RGD
    Official Full Name
    JNK1/MAPK8 associated membrane protein likeprovided by RGD
    Primary source
    RGD:1562515
    See related
    Ensembl:ENSRNOG00000024604 AllianceGenome:RGD:1562515
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1562515
    Summary
    Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in ubiquitin-dependent ERAD pathway. Predicted to be integral component of membrane. Orthologous to human JKAMP (JNK1/MAPK8 associated membrane protein). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See Jkampl in Genome Data Viewer
    Location:
    4q33
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (107078531..107079631, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (105520442..105521542, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (101392229..101393329, complement)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene succinate-CoA ligase GDP/ADP-forming subunit alpha Neighboring gene olfactory receptor family 6 subfamily C member 235, pseudogene 1 Neighboring gene polypyrimidine tract binding protein 1, pseudogene 3 Neighboring gene uncharacterized LOC108350866

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in ERAD pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in response to unfolded protein IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC500204

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109242.1NP_001102712.1  uncharacterized protein LOC500204

      See identical proteins and their annotated locations for NP_001102712.1

      Status: PREDICTED

      Source sequence(s)
      CH473957
      UniProtKB/TrEMBL
      A6IAE5, D4A0V1
      Related
      ENSRNOP00000007636.1, ENSRNOT00000007636.4
      Conserved Domains (1) summary
      pfam05571
      Location:3294
      DUF766; Protein of unknown function (DUF766)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      107078531..107079631 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)