Nap1l5 nucleosome assembly protein 1-like 5 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Nap1l5provided by MGI
Official Full Name: nucleosome assembly protein 1-like 5provided by MGI
Primary source: MGI:MGI:1923555
See related: Ensembl:ENSMUSG00000055430 AllianceGenome:MGI:1923555
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 1110020M21Rik
Summary: Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in nucleosome assembly. Predicted to be active in chromatin and nucleus. Is expressed in several structures, including brain; extraembryonic component; liver; reproductive system; and spinal cord. Orthologous to human NAP1L5 (nucleosome assembly protein 1 like 5). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human all
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Genomic context

Location:: 6 B3; 6 27.9 cM

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	6	NC_000072.7 (58882218..58884111, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	6	NC_000072.6 (58905233..58907126, complement)

Chromosome 6 - NC_000072.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Allele-specific polyadenylation occurs at the imprinted Herc3/Nap1l5 locus.
Title: Epigenetic control of alternative mRNA processing at the imprinted Herc3/Nap1l5 locus.
Nap1l5 expression is localised mainly to the adrenal medulla, whilst Peg13 expression is observed more generally throughout the adrenal medulla and the outer cortical layers
Title: Expression patterns of the novel imprinted genes Nap1l5 and Peg13 and their non-imprinted host genes in the adult mouse brain.

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

PMC196544P2 (e-PCR)
- UniSTS:271813

Nap1l5 (e-PCR), detects polymorphism
- UniSTS:532169

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info
involved_in nucleosome assembly	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: nucleosome assembly protein 1-like 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.