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    SCW11 putative glucan endo-1,3-beta-D-glucosidase [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852856, updated on 17-May-2024

    Summary

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    Gene symbol
    SCW11
    Gene description
    putative glucan endo-1,3-beta-D-glucosidase
    Primary source
    FungiDB:YGL028C
    Locus tag
    YGL028C
    See related
    SGD:S000002996; AllianceGenome:SGD:S000002996; VEuPathDB:YGL028C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable 1,3-beta-glucanosyltransferase activity and glucan endo-1,3-beta-D-glucosidase activity. Predicted to be involved in cell wall organization. Located in fungal-type cell wall. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See SCW11 in Genome Data Viewer
    Location:
    chromosome: VII
    Exon count:
    1
    Sequence:
    Chromosome: VII; NC_001139.9 (441281..442909, complement)

    Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene Cgr1p Neighboring gene tRNA-Phe Neighboring gene mannosyl-oligosaccharide glucosidase Neighboring gene tryptophan synthase TRP5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001139.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Disruption of multiple genes whose deletion causes lactic-acid resistance improves lactic-acid resistance and productivity in Saccharomyces cerevisiae. Suzuki T, et al. J Biosci Bioeng, 2013 May. PMID 23290995
    2. The Cbk1p pathway is important for polarized cell growth and cell separation in Saccharomyces cerevisiae. Bidlingmaier S, et al. Mol Cell Biol, 2001 Apr. PMID 11259593, Free PMC Article
    3. A model for cell wall dissolution in mating yeast cells: polarized secretion and restricted diffusion of cell wall remodeling enzymes induces local dissolution. Huberman LB, et al. PLoS One, 2014. PMID 25329559, Free PMC Article
    4. New potential cell wall glucanases of Saccharomyces cerevisiae and their involvement in mating. Cappellaro C, et al. J Bacteriol, 1998 Oct. PMID 9748433, Free PMC Article
    5. Binding assay for incorporation of alkali-extractable proteins in the Saccharomyces cerevisiae cell wall. Teparić R, et al. Yeast, 2007 Apr. PMID 17315268

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables glucan endo-1,3-beta-D-glucosidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables glucan endo-1,3-beta-D-glucosidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables hydrolase activity, acting on glycosyl bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in cell wall organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cell periphery HDA PubMed 
    is_active_in cell surface IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in extracellular region IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in fungal-type cell wall IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in fungal-type cell wall IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in fungal-type cell wall IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative glucan endo-1,3-beta-D-glucosidase
    NP_011487.3
    • Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based on its regulation by Ste12p

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001139.9 Reference assembly

      Range
      441281..442909 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001180893.3 → NP_011487.3  TPA: putative glucan endo-1,3-beta-D-glucosidase [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011487.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VUB0, P53189
      UniProtKB/TrEMBL
      A0A8H4FCV6, C8Z8L4, N1P9S5
      Conserved Domains (1) summary
      cl23725
      Location:281 → 542
      Glyco_hydro; Glycosyl hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53189.1

    Gene LinkOut

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