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    Armcx5 armadillo repeat containing, X-linked 5 [ Mus musculus (house mouse) ]

    Gene ID: 494468, updated on 12-May-2024

    Summary

    Official Symbol
    Armcx5provided by MGI
    Official Full Name
    armadillo repeat containing, X-linked 5provided by MGI
    Primary source
    MGI:MGI:2148026
    See related
    Ensembl:ENSMUSG00000072969 AllianceGenome:MGI:2148026
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Orthologous to human ARMCX5 (armadillo repeat containing X-linked 5). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in cortex adult (RPKM 5.4), frontal lobe adult (RPKM 4.5) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Armcx5 in Genome Data Viewer
    Location:
    X F1; X 57.26 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (134643482..134648077)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (135742692..135747328)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene t-complex 11 family, X-linked 2 Neighboring gene STARR-seq mESC enhancer starr_47970 Neighboring gene thymosin beta 15a Neighboring gene G protein-coupled receptor associated sorting protein 1 Neighboring gene microRNA 7646 Neighboring gene RAB18, member RAS oncogene family pseudogene Neighboring gene microRNA 1970

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC38735

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    armadillo repeat-containing X-linked protein 5

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001009575.6NP_001009575.2  armadillo repeat-containing X-linked protein 5

      See identical proteins and their annotated locations for NP_001009575.2

      Status: VALIDATED

      Source sequence(s)
      AL671911, AL683822
      Consensus CDS
      CCDS30408.1
      UniProtKB/Swiss-Prot
      A2AGB5, Q3UZB0
      UniProtKB/TrEMBL
      Q8R0B3
      Related
      ENSMUSP00000094045.3, ENSMUST00000096321.3
      Conserved Domains (1) summary
      pfam04826
      Location:349600
      Arm_2; Armadillo-like

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      134643482..134648077
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)