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    LOC102547703 uncharacterized LOC102547703 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102547703, updated on 29-Feb-2024

    Summary

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    Symbol
    LOC102547703provided by RGD
    Full Name
    uncharacterized LOC102547703provided by RGD
    Primary source
    RGD:7719070
    See related
    AllianceGenome:RGD:7719070
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Brain (RPKM 33.9), Lung (RPKM 19.7) and 9 other tissues See more
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    Genomic context

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    See LOC102547703 in Genome Data Viewer
    Location:
    6q16
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (55456894..55487271, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (49729403..49759830, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (52444377..52459882, complement)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene cadherin-related family member 3 Neighboring gene uncharacterized LOC134479364 Neighboring gene ataxin 7-like 1 Neighboring gene uncharacterized LOC102549100 Neighboring gene EF-hand calcium binding domain 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    uncharacterized protein LOC102547703

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      55456894..55487271 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063262753.1 → XP_063118823.1  uncharacterized protein LOC102547703 isoform X3

    2. XM_063262752.1 → XP_063118822.1  uncharacterized protein LOC102547703 isoform X2

    3. XM_063262751.1 → XP_063118821.1  uncharacterized protein LOC102547703 isoform X1

    RNA

    1. XR_010052628.1 RNA Sequence

    2. XR_010052624.1 RNA Sequence

    3. XR_010052633.1 RNA Sequence

    4. XR_010052629.1 RNA Sequence

    5. XR_010052635.1 RNA Sequence

    6. XR_010052619.1 RNA Sequence

    7. XR_010052599.1 RNA Sequence

    8. XR_010052625.1 RNA Sequence

    9. XR_010052621.1 RNA Sequence

    10. XR_010052618.1 RNA Sequence

    11. XR_010052620.1 RNA Sequence

    12. XR_010052617.1 RNA Sequence

    13. XR_010052626.1 RNA Sequence

    14. XR_010052603.1 RNA Sequence

    15. XR_010052604.1 RNA Sequence

    16. XR_010052611.1 RNA Sequence

    17. XR_010052630.1 RNA Sequence

    18. XR_010052627.1 RNA Sequence

    19. XR_010052607.1 RNA Sequence

    20. XR_010052631.1 RNA Sequence

    21. XR_010052622.1 RNA Sequence

    22. XR_010052632.1 RNA Sequence

    23. XR_010052605.1 RNA Sequence

    24. XR_010052606.1 RNA Sequence

    25. XR_010052602.1 RNA Sequence

    26. XR_010052609.1 RNA Sequence

    27. XR_010052610.1 RNA Sequence

    28. XR_005505856.2 RNA Sequence

    29. XR_010052608.1 RNA Sequence

    30. XR_005505861.2 RNA Sequence

    31. XR_005505865.2 RNA Sequence

    32. XR_010052601.1 RNA Sequence

    33. XR_010052600.1 RNA Sequence

    34. XR_005505867.2 RNA Sequence

    35. XR_010052616.1 RNA Sequence

    36. XR_005505873.2 RNA Sequence

    37. XR_010052612.1 RNA Sequence

    38. XR_005505870.2 RNA Sequence

    39. XR_010052634.1 RNA Sequence

    40. XR_010052623.1 RNA Sequence

    41. XR_005505879.2 RNA Sequence

    42. XR_005505874.2 RNA Sequence

    43. XR_010052615.1 RNA Sequence

    44. XR_010052614.1 RNA Sequence

    45. XR_010052613.1 RNA Sequence

    46. XR_005505868.2 RNA Sequence

    47. XR_005505859.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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