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    side-II sidestep II [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3346206, updated on 10-May-2024

    Summary

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    Official Symbol
    side-IIprovided by FlyBase
    Official Full Name
    sidestep IIprovided by FlyBase
    Primary source
    FLYBASE:FBgn0259213
    Locus tag
    Dmel_CG42313
    See related
    AllianceGenome:FB:FBgn0259213
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    42313; BG:DS01219.3; BG:DS03144.1; BG:SD01219.3; CG15275; CG15276; cg15277; CG15277; CG33515; CG42313; CT35222; Dmel\CG42313
    Old locus tag
    Dmel_CG15277; Dmel_CG33515
    Summary
    Is expressed in adult head; embryonic/larval central nervous system; and embryonic/larval muscle system. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See side-II in Genome Data Viewer
    Location:
    35B7-35B7; 2-50 cM
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (14907489..14972300, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (14907489..14972300, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45302 Neighboring gene Protamine B Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45331 Neighboring gene moladietz

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Host Genetic Control of the Microbiota Mediates the Drosophila Nutritional Phenotype. Chaston JM, et al. Appl Environ Microbiol, 2016 Jan 15. PMID 26567306, Free PMC Article
    2. Searching for guidance cues: follow the Sidestep trail. Aberle H. Fly (Austin), 2009 Oct-Dec. PMID 19786838
    3. Human BOULE gene rescues meiotic defects in infertile flies. Xu EY, et al. Hum Mol Genet, 2003 Jan 15. PMID 12499397
    4. Modular transcriptional programs separately define axon and dendrite connectivity. Kurmangaliyev YZ, et al. Elife, 2019 Nov 5. PMID 31687928, Free PMC Article
    5. Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development. Li H, et al. Elife, 2017 Aug 15. PMID 28829740, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    sidestep II
    Names
    CG42313-PA
    CG42313-PB
    CG42313-PC
    side-II-PA
    side-II-PB
    side-II-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      14907489..14972300 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299017.1 → NP_001285946.1  sidestep II, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285946.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q59DZ1
      Conserved Domains (3) summary
      smart00410
      Location:55 → 160
      IG_like; Immunoglobulin like
      pfam13895
      Location:376 → 460
      Ig_2; Immunoglobulin domain
      cl11960
      Location:289 → 363
      Ig; Immunoglobulin domain

    2. NM_001014485.5 → NP_001014485.3  sidestep II, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001014485.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q59DZ1
      Conserved Domains (3) summary
      smart00410
      Location:55 → 160
      IG_like; Immunoglobulin like
      pfam13895
      Location:376 → 460
      Ig_2; Immunoglobulin domain
      cl11960
      Location:289 → 363
      Ig; Immunoglobulin domain

    3. NM_001414093.1 → NP_001400995.1  sidestep II, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A9F2H0X3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q59DZ1 Q59DZ1

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