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    Kctd14 potassium channel tetramerization domain containing 14 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 308836, updated on 13-Apr-2024

    Summary

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    Official Symbol
    Kctd14provided by RGD
    Official Full Name
    potassium channel tetramerization domain containing 14provided by RGD
    Primary source
    RGD:1306430
    See related
    Ensembl:ENSRNOG00000012494 AllianceGenome:RGD:1306430
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be involved in protein homooligomerization. Orthologous to human KCTD14 (potassium channel tetramerization domain containing 14). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Testes (RPKM 33.1), Lung (RPKM 22.1) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Kctd14 in Genome Data Viewer
    Location:
    1q32
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (161172906..161177914)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (151761688..151766693)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (162418389..162424322)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene peroxiredoxin 1, pseudogene 2 Neighboring gene thyroid hormone responsive Neighboring gene integrator complex subunit 4 Neighboring gene adipogenesis associated, Mth938 domain containing

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein KCTD14
    Names
    potassium channel tetramerisation domain containing 14

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001400257.1 → NP_001387186.1  BTB/POZ domain-containing protein KCTD14

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      F1M0C4
      Related
      ENSRNOP00000016653.3, ENSRNOT00000016654.5

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      161172906..161177914
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039101080.2 → XP_038957008.1  BTB/POZ domain-containing protein KCTD14 isoform X1

      UniProtKB/TrEMBL
      A6I697
      Conserved Domains (1) summary
      cl38908
      Location:1 → 83
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

    2. XM_063262787.1 → XP_063118857.1  BTB/POZ domain-containing protein KCTD14 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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