U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Rgs5 regulator of G-protein signaling 5 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 54294, updated on 5-Mar-2024

    Summary

    Official Symbol
    Rgs5provided by RGD
    Official Full Name
    regulator of G-protein signaling 5provided by RGD
    Primary source
    RGD:3568
    See related
    Ensembl:ENSRNOG00000002730 AllianceGenome:RGD:3568
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Involved in negative regulation of vascular associated smooth muscle cell proliferation and signal transduction. Predicted to be located in cytoplasm and membrane. Biomarker of hypertension. Human ortholog(s) of this gene implicated in essential hypertension. Orthologous to human RGS5 (regulator of G protein signaling 5). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Heart (RPKM 1671.0), Muscle (RPKM 867.1) and 7 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Rgs5 in Genome Data Viewer
    Location:
    13q24
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (84381077..84417875)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (81848254..81885053)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (87966820..88002831)

    Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103692065 Neighboring gene translocase of inner mitochondrial membrane 23, pseudogene 7 Neighboring gene NUF2 component of NDC80 kinetochore complex Neighboring gene regulator of G-protein signaling 4 Neighboring gene uncharacterized LOC134481531 Neighboring gene coiled-coil domain containing 190

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    regulator of G-protein signaling 5

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019341.1NP_062214.1  regulator of G-protein signaling 5

      See identical proteins and their annotated locations for NP_062214.1

      Status: PROVISIONAL

      Source sequence(s)
      AF241259
      UniProtKB/Swiss-Prot
      P49800, Q9JKD7
      UniProtKB/TrEMBL
      A0A0G2JVF3, A5YN34
      Related
      ENSRNOP00000069463.2, ENSRNOT00000079593.2
      Conserved Domains (1) summary
      cd08717
      Location:65178
      RGS_RGS5; Regulator of G protein signaling (RGS) domain found in the RGS5 protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086031.1 Reference GRCr8

      Range
      84381077..84417875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)