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    Tektip1 tektin bundle interacting protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 432479, updated on 5-Mar-2024

    Summary

    Official Symbol
    Tektip1provided by MGI
    Official Full Name
    tektin bundle interacting protein 1provided by MGI
    Primary source
    MGI:MGI:1921072
    See related
    Ensembl:ENSMUSG00000020234 AllianceGenome:MGI:1921072
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2210409H10Rik; 4930404N11Rik; 5730551K18Rik
    Summary
    Is expressed in central nervous system; embryo; retina; retina inner nuclear layer; and retina outer nuclear layer. Orthologous to human C19orf71 (chromosome 19 open reading frame 71). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in stomach adult (RPKM 123.4), testis adult (RPKM 110.8) and 18 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Tektip1 in Genome Data Viewer
    Location:
    10 C1; 10 39.72 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (81199858..81201654, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (81364024..81365820, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene GIPC PDZ domain containing family, member 3 Neighboring gene STARR-positive B cell enhancer ABC_E1809 Neighboring gene high mobility group 20B Neighboring gene STARR-seq mESC enhancer starr_27329 Neighboring gene STARR-positive B cell enhancer ABC_E11448 Neighboring gene major facilitator superfamily domain containing 12 Neighboring gene fizzy and cell division cycle 20 related 1 Neighboring gene STARR-seq mESC enhancer starr_27331 Neighboring gene STARR-seq mESC enhancer starr_27332 Neighboring gene predicted gene, 48551 Neighboring gene microRNA 6913 Neighboring gene deoxyhypusine hydroxylase/monooxygenase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in axonemal A tubule inner sheath IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    tektin bundle-interacting protein 1
    Names
    uncharacterized protein C19orf71 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014836.3NP_001014836.2  tektin bundle-interacting protein 1

      See identical proteins and their annotated locations for NP_001014836.2

      Status: VALIDATED

      Source sequence(s)
      BC145960, BU945663
      Consensus CDS
      CCDS24056.1
      UniProtKB/Swiss-Prot
      A6H6Q4, B9EI87, Q9D5N6
      Related
      ENSMUSP00000020456.5, ENSMUST00000020456.5
      Conserved Domains (1) summary
      pfam15041
      Location:23204
      DUF4531; Domain of unknown function (DUF4531)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      81199858..81201654 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)