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    CG13689 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33241, updated on 10-May-2024

    Summary

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    Official Symbol
    CG13689provided by FlyBase
    Primary source
    FLYBASE:FBgn0031270
    Locus tag
    Dmel_CG13689
    See related
    AllianceGenome:FB:FBgn0031270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13689
    Orthologs
    all
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    Genomic context

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    See CG13689 in Genome Data Viewer
    Location:
    21E2-21E2; 2-1.5 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (602813..604430)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (602813..604430)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene PvuII-PstI homology 13 Neighboring gene long non-coding RNA:CR46148 Neighboring gene Goosecoid Neighboring gene long non-coding RNA:CR43648 Neighboring gene long non-coding RNA:CR43649

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. UpSET recruits HDAC complexes and restricts chromatin accessibility and acetylation at promoter regions. Rincon-Arano H, et al. Cell, 2012 Dec 7. PMID 23177352, Free PMC Article
    2. Active promoters and insulators are marked by the centrosomal protein 190. Bartkuhn M, et al. EMBO J, 2009 Apr 8. PMID 19229299, Free PMC Article
    3. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    4. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13689-PA
    CG13689-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      602813..604430
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001272910.1 → NP_001259839.1  uncharacterized protein Dmel_CG13689, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259839.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PBN8

    2. NM_134694.2 → NP_608538.2  uncharacterized protein Dmel_CG13689, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608538.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V437, Q9VPS0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PBN8 M9PBN8
    Q9VPS0 Q9VPS0

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