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    CG12713 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39724, updated on 10-May-2024

    Summary

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    Official Symbol
    CG12713provided by FlyBase
    Primary source
    FLYBASE:FBgn0036536
    Locus tag
    Dmel_CG12713
    See related
    AllianceGenome:FB:FBgn0036536
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12713
    Summary
    Predicted to be located in cytoplasm and nucleus. Is expressed in organism. Human ortholog(s) of this gene implicated in congenital dyserythropoietic anemia type Ib. Orthologous to human CDIN1 (CDAN1 interacting nuclease 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG12713 in Genome Data Viewer
    Location:
    72A2-72A2; 3-43 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (15832464..15833947)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (15825564..15827047)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Decapping protein 2 Neighboring gene diablo Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene meru Neighboring gene mir-263b stem loop

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment. Izutsu M, et al. PLoS One, 2012. PMID 22432011, Free PMC Article
    2. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article
    3. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    4. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article
    5. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12713-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      15832464..15833947
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140549.3 → NP_648806.1  uncharacterized protein Dmel_CG12713 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648806.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95RW6, Q9VUU6
      Related
      FBpp0075261
      Conserved Domains (1) summary
      pfam14811
      Location:145 → 274
      TPD; Protein of unknown function TPD sequence-motif
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VUU6 Q9VUU6

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