U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    BomS1 Bomanin Short 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37100, updated on 10-May-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    BomS1provided by FlyBase
    Official Full Name
    Bomanin Short 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0034329
    Locus tag
    Dmel_CG18108
    See related
    AllianceGenome:FB:FBgn0034329
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RH08745; Bom1; CG18108; DIM 1; DIM-1; DIM1; Dmel\CG18108; IM-1; IM1; IM2-like
    Summary
    Involved in defense response. Located in extracellular region. Is expressed in embryonic midgut chamber. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BomS1 in Genome Data Viewer
    Location:
    55C4-55C4; 2-85 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18383949..18384378)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14271454..14271883)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Bomanin Tailed 1 Neighboring gene Bomanin Bicipital 1 Neighboring gene Bomanin Short 4 Neighboring gene Bomanin Bicipital 2 Neighboring gene Bomanin Short 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Microbiome assembly on Drosophila body surfaces benefits the flies to combat fungal infections. Hong S, et al. iScience, 2022 Jun 17. PMID 35663020, Free PMC Article
    2. Inhibition of NF-κB in astrocytes is sufficient to delay neurodegeneration induced by proteotoxicity in neurons. Li YX, et al. J Neuroinflammation, 2018 Sep 11. PMID 30205834, Free PMC Article
    3. A Toll pathway effector protects Drosophila specifically from distinct toxins secreted by a fungus or a bacterium. Huang J, et al. Proc Natl Acad Sci U S A, 2023 Mar 21. PMID 36917667, Free PMC Article
    4. LncRNA-CR11538 Decoys Dif/Dorsal to Reduce Antimicrobial Peptide Products for Restoring Drosophila Toll Immunity Homeostasis. Zhou H, et al. Int J Mol Sci, 2021 Sep 18. PMID 34576280, Free PMC Article
    5. Serine proteolytic pathway activation reveals an expanded ensemble of wound response genes in Drosophila. Patterson RA, et al. PLoS One, 2013. PMID 23637905, Free PMC Article

    See all (113) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in antifungal humoral response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in defense response IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in response to bacterium HEP PubMed 
    involved_in response to mycotoxin IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    bomanin short 1
    Names
    BomS1-PA
    CG18108-PA
    Immune-induced peptide 1 precursor
    bomanin 1
    bomanin S1
    immune induced molecule 1
    immune-induced molecule 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18383949..18384378
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137475.3 → NP_611319.1  bomanin short 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611319.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P82706, Q9V8F6
      Related
      FBpp0085843
      Conserved Domains (1) summary
      pfam08194
      Location:1 → 40
      DIM; DIM protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P82706.2 P82706
    Q8MZG7 Q8MZG7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools