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    CG12824 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35727, updated on 10-May-2024

    Summary

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    Official Symbol
    CG12824provided by FlyBase
    Primary source
    FLYBASE:FBgn0033222
    Locus tag
    Dmel_CG12824
    See related
    AllianceGenome:FB:FBgn0033222
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12824
    Orthologs
    all
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    Genomic context

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    See CG12824 in Genome Data Viewer
    Location:
    43E16-43E16; 2-57 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (7790368..7791170)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (3677873..3678675)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene mir-4980 stem loop Neighboring gene Calcineurin B2 Neighboring gene uncharacterized protein Neighboring gene Glyceraldehyde 3 phosphate dehydrogenase 1 Neighboring gene DNA polymerase zeta subunit 1 Neighboring gene Nop17 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of alternative splicing in newly evolved genes of Drosophila. Zhan Z, et al. Gene, 2011 Jan 1. PMID 20851753
    2. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    3. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    5. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12824-PA
    CG12824-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      7790368..7791170
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136479.3 → NP_610323.2  uncharacterized protein Dmel_CG12824, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610323.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z748

    2. NM_001103744.2 → NP_001097214.1  uncharacterized protein Dmel_CG12824, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097214.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DY57, B9EL01
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1Z748 A1Z748
    A8DY57 A8DY57

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