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    BomS6 Bomanin Short 6 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 50206, updated on 10-May-2024

    Summary

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    Official Symbol
    BomS6provided by FlyBase
    Official Full Name
    Bomanin Short 6provided by FlyBase
    Primary source
    FLYBASE:FBgn0040733
    Locus tag
    Dmel_CG15068
    See related
    AllianceGenome:FB:FBgn0040733
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Bom068; CG15068; CT34939; Dmel\CG15068
    Summary
    Predicted to be involved in defense response. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See BomS6 in Genome Data Viewer
    Location:
    55C4-55C4; 2-85 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18390353..18390629, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14277858..14278134, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Bomanin Tailed 2 Neighboring gene Bomanin Short 5 Neighboring gene Imaginal disc growth factor 5 Neighboring gene Glutathione S transferase E10 Neighboring gene Glutathione S transferase E1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Short-Form Bomanins Mediate Humoral Immunity in Drosophila. Lindsay SA, et al. J Innate Immun, 2018. PMID 29920489, Free PMC Article
    2. An effector Peptide family required for Drosophila toll-mediated immunity. Clemmons AW, et al. PLoS Pathog, 2015 Apr. PMID 25915418, Free PMC Article
    3. Bombardier Enables Delivery of Short-Form Bomanins in the Drosophila Toll Response. Lin SJH, et al. Front Immunol, 2019. PMID 31998316, Free PMC Article
    4. Large clusters of co-expressed genes in the Drosophila genome. Boutanaev AM, et al. Nature, 2002 Dec 12. PMID 12478293
    5. Mycobacterium abscessus resists the innate cellular response by surviving cell lysis of infected phagocytes. Touré H, et al. PLoS Pathog, 2023 Mar. PMID 36972320, Free PMC Article

    See all (44) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in response to mycotoxin IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bomanin short 6
    Names
    BomS6-PA
    CG15068-PA
    bomanin 068
    bomanin S6

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18390353..18390629 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_176222.2 → NP_788402.1  bomanin short 6 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788402.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A1ZB64, F2FBA7
      Related
      FBpp0085906
      Conserved Domains (1) summary
      pfam08194
      Location:1 → 36
      DIM; DIM protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1ZB64.1 A1ZB64

    Gene LinkOut

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