LOC426615 mesoderm induction early response protein 3-like [Gallus gallus (chicken)] - Gene

Summary

Gene symbol: LOC426615
Gene description: mesoderm induction early response protein 3-like
See related: Ensembl:ENSGALG00010012336
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as: MIER3L
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Genomic context

Location:: chromosome: W

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	W	NC_052571.1 (4775087..4927129, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	W	NC_059535.1 (4775087..4927129, complement)

Chromosome W - NC_052571.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables histone deacetylase binding	IEA Inferred from Electronic Annotation more info	PubMed
enables transcription corepressor activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in negative regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: mesoderm induction early response protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052571.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

4775087..4927129 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015300439.3 → XP_015155925.2 mesoderm induction early response protein 3 isoform X5

UniProtKB/TrEMBL

A0A8V0YMQ4

Conserved Domains (1) summary

cd11661
Location:281 → 325

SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
XM_015300438.3 → XP_015155924.2 mesoderm induction early response protein 3 isoform X4

UniProtKB/TrEMBL

A0A182C5Y4, A0A8V0YMQ4

Related

ENSGALP00010017165.1, ENSGALT00010029531.1

Conserved Domains (1) summary

cd11661
Location:282 → 326

SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
XM_040655239.2 → XP_040511173.1 mesoderm induction early response protein 3 isoform X7

UniProtKB/TrEMBL

A0A8V0YMQ4

Conserved Domains (1) summary

cd11661
Location:248 → 292

SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
XM_040655237.2 → XP_040511171.1 mesoderm induction early response protein 3 isoform X2

UniProtKB/TrEMBL

A0A8V0YMQ4

Conserved Domains (1) summary

cd11661
Location:316 → 360

SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
XM_015300440.3 → XP_015155926.1 mesoderm induction early response protein 3 isoform X1

UniProtKB/TrEMBL

A0A8V0YMQ4

Conserved Domains (3) summary

smart00717
Location:315 → 362

SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

cd11661
Location:317 → 361

SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins

pfam01448
Location:211 → 257

ELM2; ELM2 domain
XM_040655238.2 → XP_040511172.1 mesoderm induction early response protein 3 isoform X6

UniProtKB/TrEMBL

A0A8V0YMQ4

Conserved Domains (1) summary

cd11661
Location:255 → 299

SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
XM_046905142.1 → XP_046761098.1 mesoderm induction early response protein 3 isoform X3

UniProtKB/TrEMBL

A0A8V0YMQ4

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_059535.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

4775087..4927129 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046934531.1 → XP_046790487.1 mesoderm induction early response protein 3 isoform X5

UniProtKB/TrEMBL

A0A8V0YMQ4
XM_046934530.1 → XP_046790486.1 mesoderm induction early response protein 3 isoform X4

UniProtKB/TrEMBL

A0A182C5Y4, A0A8V0YMQ4
XM_046934533.1 → XP_046790489.1 mesoderm induction early response protein 3 isoform X7

UniProtKB/TrEMBL

A0A8V0YMQ4
XM_046934528.1 → XP_046790484.1 mesoderm induction early response protein 3 isoform X2

UniProtKB/TrEMBL

A0A8V0YMQ4
XM_046934527.1 → XP_046790483.1 mesoderm induction early response protein 3 isoform X1

UniProtKB/TrEMBL

A0A8V0YMQ4
XM_046934532.1 → XP_046790488.1 mesoderm induction early response protein 3 isoform X6

UniProtKB/TrEMBL

A0A8V0YMQ4
XM_046934529.1 → XP_046790485.1 mesoderm induction early response protein 3 isoform X3

UniProtKB/TrEMBL

A0A8V0YMQ4