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    CLGN calmegin [ Gallus gallus (chicken) ]

    Gene ID: 422447, updated on 6-Jun-2024

    Summary

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    Symbol
    CLGNprovided by CGNC
    Full Name
    calmeginprovided by CGNC
    Primary source
    CGNC:7465
    See related
    Ensembl:ENSGALG00010009166
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CLGN in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (29216246..29234358, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (29168255..29186698, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene mastermind like transcriptional coactivator 3 Neighboring gene microRNA 1575 Neighboring gene short coiled-coil protein Neighboring gene alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase D Neighboring gene uncharacterized LOC124418361 Neighboring gene uncharacterized LOC121113206

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calmegin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      29216246..29234358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025150421.3 → XP_025006189.2  calmegin isoform X8

      UniProtKB/TrEMBL
      A0A8V0XWB1

    2. XM_025150419.3 → XP_025006187.2  calmegin isoform X4

      UniProtKB/TrEMBL
      A0A8V0XWB1

    3. XM_025150420.3 → XP_025006188.2  calmegin isoform X7

      UniProtKB/TrEMBL
      A0A8V0XWB1, A0A8V0Y0R1
      Related
      ENSGALP00010012533.1, ENSGALT00010021892.1

    4. XM_004940943.5 → XP_004941000.2  calmegin isoform X3

      UniProtKB/TrEMBL
      A0A8V0XWB1

    5. XM_040699528.2 → XP_040555462.1  calmegin isoform X4

      UniProtKB/TrEMBL
      A0A8V0XWB1

    6. XM_046940472.1 → XP_046796428.1  calmegin isoform X3

      UniProtKB/TrEMBL
      A0A8V0XWB1

    7. XM_046940470.1 → XP_046796426.1  calmegin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XWB1

    8. XM_040699527.2 → XP_040555461.1  calmegin isoform X2

      UniProtKB/TrEMBL
      A0A8V0XWB1
      Related
      ENSGALP00010012539.1, ENSGALT00010021902.1

    9. XM_040699529.2 → XP_040555463.1  calmegin isoform X5

      UniProtKB/TrEMBL
      A0A8V0XWB1, A0A8V0XWB7
      Related
      ENSGALP00010012544.1, ENSGALT00010021909.1

    10. XM_025150418.3 → XP_025006186.2  calmegin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XWB1

    11. XM_004940945.5 → XP_004941002.2  calmegin isoform X6

      UniProtKB/TrEMBL
      A0A8V0XWB1

    12. XM_025150417.3 → XP_025006185.2  calmegin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XWB1

    13. XM_046940471.1 → XP_046796427.1  calmegin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XWB1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      29168255..29186698 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040671686.2 → XP_040527620.1  calmegin isoform X8

      UniProtKB/TrEMBL
      A0A8V0XWB1

    2. XM_040671682.2 → XP_040527616.1  calmegin isoform X4

      UniProtKB/TrEMBL
      A0A8V0XWB1

    3. XM_040671685.2 → XP_040527619.1  calmegin isoform X7

      UniProtKB/TrEMBL
      A0A8V0XWB1

    4. XM_040671680.2 → XP_040527614.1  calmegin isoform X3

      UniProtKB/TrEMBL
      A0A8V0XWB1

    5. XM_040671681.2 → XP_040527615.1  calmegin isoform X4

      UniProtKB/TrEMBL
      A0A8V0XWB1

    6. XM_046916859.1 → XP_046772815.1  calmegin isoform X3

      UniProtKB/TrEMBL
      A0A8V0XWB1

    7. XM_046916857.1 → XP_046772813.1  calmegin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XWB1

    8. XM_040671679.2 → XP_040527613.1  calmegin isoform X2

      UniProtKB/TrEMBL
      A0A8V0XWB1

    9. XM_040671683.2 → XP_040527617.1  calmegin isoform X5

      UniProtKB/TrEMBL
      A0A8V0XWB1

    10. XM_040671677.2 → XP_040527611.1  calmegin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XWB1

    11. XM_040671684.2 → XP_040527618.1  calmegin isoform X6

      UniProtKB/TrEMBL
      A0A8V0XWB1

    12. XM_040671678.2 → XP_040527612.1  calmegin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XWB1

    13. XM_046916858.1 → XP_046772814.1  calmegin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XWB1
    Nucleotide Protein
    Heading Accession and Version

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