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    CARNMT1 carnosine N-methyltransferase 1 [ Gallus gallus (chicken) ]

    Gene ID: 427256, updated on 5-Mar-2024

    Summary

    Official Symbol
    CARNMT1provided by CGNC
    Official Full Name
    carnosine N-methyltransferase 1provided by CGNC
    Primary source
    CGNC:11279
    See related
    Ensembl:ENSGALG00010015413
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C9orf41; CZH9ORF41
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See CARNMT1 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (37427432..37449416, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (37427432..37449416, complement)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112530580 Neighboring gene uncharacterized LOC121108627 Neighboring gene C9orf40 homolog Neighboring gene nicotinamide riboside kinase 1 Neighboring gene osteoclast stimulating factor 1 Neighboring gene uncharacterized LOC121108630 Neighboring gene uncharacterized LOC121108628

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General protein information

    Preferred Names
    carnosine N-methyltransferase
    NP_001383538.1
    NP_001383539.1
    XP_025001035.1
    XP_046761330.1
    XP_046761331.1
    XP_046791063.1
    XP_046791064.1
    XP_046791065.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001396609.1NP_001383538.1  carnosine N-methyltransferase

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) has exons 1, 2, 3, 4, 5, 7, 8, 9, and 10.
      Source sequence(s)
      AJ719383, BU105588, BU108886, BU211404, CF253952
      UniProtKB/Swiss-Prot
      F1N9S8
      UniProtKB/TrEMBL
      A0A0G3FDI9
      Related
      ENSGALP00010021531.1, ENSGALT00010037014.1
      Conserved Domains (1) summary
      pfam07942
      Location:180444
      N2227; N2227-like protein
    2. NM_001396610.1NP_001383539.1  carnosine N-methyltransferase

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) has exons 1, 2, 3, 4, 6, 7, 8, and 9.
      Source sequence(s)
      AJ719383, AJ742405, AJ742412, BU105588, BU108886, BU211404, BU228273, BU316360, CR524173, DT657474

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      37427432..37449416 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025145267.3XP_025001035.1  carnosine N-methyltransferase isoform X1

      Conserved Domains (1) summary
      pfam07942
      Location:66330
      N2227; N2227-like protein
    2. XM_046905375.1XP_046761331.1  carnosine N-methyltransferase isoform X1

    3. XM_046905374.1XP_046761330.1  carnosine N-methyltransferase isoform X1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      37427432..37449416 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046935107.1XP_046791063.1  carnosine N-methyltransferase isoform X1

    2. XM_046935109.1XP_046791065.1  carnosine N-methyltransferase isoform X1

    3. XM_046935108.1XP_046791064.1  carnosine N-methyltransferase isoform X1

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001031425.1: Suppressed sequence

      Description
      NM_001031425.1: This RefSeq was temporarily suppressed because there were several differences compared to available sequence data. These differences resulted in premature translation termination and a protein that is not supported by protein homology.