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    AARS1 alanyl-tRNA synthetase 1 [ Gallus gallus (chicken) ]

    Gene ID: 415668, updated on 6-Jun-2024

    Summary

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    Official Symbol
    AARS1provided by CGNC
    Official Full Name
    alanyl-tRNA synthetase 1provided by CGNC
    Primary source
    CGNC:50043
    See related
    Ensembl:ENSGALG00010021722
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    AARS
    Orthologs
    human mouse all
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    Genomic context

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    See AARS1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (1194641..1207049)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (1366991..1379399)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing Neighboring gene adrenocortical dysplasia homolog Neighboring gene uncharacterized LOC100857820 Neighboring gene uncharacterized LOC101748539 Neighboring gene heterogeneous nuclear ribonucleoprotein C-like Neighboring gene exosome component 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables alanine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables amino acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables aminoacyl-tRNA editing activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in alanyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alanine--tRNA ligase, cytoplasmic
    Names
    alanyl-tRNA synthetase, cytoplasmic
    NP_001005836.2
    XP_015134617.1
    XP_046755365.1
    XP_046781386.1
    XP_046781387.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005836.3 → NP_001005836.2  alanine--tRNA ligase, cytoplasmic

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000247
      UniProtKB/TrEMBL
      A0A8V0ZEK6, F1P5J5
      Related
      ENSGALP00010031729.1, ENSGALT00010052823.1
      Conserved Domains (1) summary
      PLN02900
      Location:6 → 959
      PLN02900; alanyl-tRNA synthetase

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1194641..1207049
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015279131.4 → XP_015134617.1  alanine--tRNA ligase, cytoplasmic isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZEK6, F1P5J5
      Related
      ENSGALP00010031705.1, ENSGALT00010052799.1
      Conserved Domains (1) summary
      PLN02900
      Location:6 → 959
      PLN02900; alanyl-tRNA synthetase

    2. XM_046899409.1 → XP_046755365.1  alanine--tRNA ligase, cytoplasmic isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZEK6, F1P5J5

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1366991..1379399
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925430.1 → XP_046781386.1  alanine--tRNA ligase, cytoplasmic isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZEK6, F1P5J5

    2. XM_046925431.1 → XP_046781387.1  alanine--tRNA ligase, cytoplasmic isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZEK6, F1P5J5
    Nucleotide Protein Strain
    Heading Accession and Version

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