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    LOC427010 zinc finger RNA-binding protein-like [ Gallus gallus (chicken) ]

    Gene ID: 427010, updated on 3-Apr-2024

    Summary

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    Gene symbol
    LOC427010
    Gene description
    zinc finger RNA-binding protein-like
    See related
    Ensembl:ENSGALG00010012519
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    IL3; ZFRL1
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    Genomic context

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    See LOC427010 in Genome Data Viewer
    Location:
    chromosome: W
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) W NC_052571.1 (5684688..5793309, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) W NC_059535.1 (5684688..5793309, complement)

    Chromosome W - NC_052571.1Genomic Context describing neighboring genes Neighboring gene Nipped-B homolog-like Neighboring gene WPG pseudogene Neighboring gene chromodomain helicase DNA binding protein 1W Neighboring gene uncharacterized LOC107055446 Neighboring gene uncharacterized LOC112530477 Neighboring gene activated RNA polymerase II transcriptional coactivator p15-like Neighboring gene syncytin-A-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables single-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger RNA-binding protein
    Names
    zinc finger RNA-binding protein-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052571.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5684688..5793309 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015300457.4 → XP_015155943.1  zinc finger RNA-binding protein isoform X3

      UniProtKB/TrEMBL
      A0A182C5W5, A0A8V0YFY9
      Related
      ENSGALP00010017459.1, ENSGALT00010030043.1
      Conserved Domains (3) summary
      smart00572
      Location:775 → 1029
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
      smart00451
      Location:572 → 603
      ZnF_U1; U1-like zinc finger
      sd00020
      Location:575 → 597
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_040655250.2 → XP_040511184.1  zinc finger RNA-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A8V0YFY9, A0A8V0YI38
      Related
      ENSGALP00010017465.1, ENSGALT00010030056.1
      Conserved Domains (3) summary
      smart00572
      Location:779 → 1033
      DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
      smart00451
      Location:576 → 607
      ZnF_U1; U1-like zinc finger
      sd00020
      Location:327 → 349
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_003640563.6 → XP_003640611.4  zinc finger RNA-binding protein isoform X1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059535.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5684688..5793309 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046934537.1 → XP_046790493.1  zinc finger RNA-binding protein isoform X3

      UniProtKB/TrEMBL
      A0A182C5W5

    2. XM_046934536.1 → XP_046790492.1  zinc finger RNA-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A8V0YI38

    3. XM_046934535.1 → XP_046790491.1  zinc finger RNA-binding protein isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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