Tafa1 TAFA chemokine like family member 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Tafa1provided by RGD
Full Name: TAFA chemokine like family member 1provided by RGD
Primary source: RGD:1563030
See related: Ensembl:ENSRNOG00000070575 AllianceGenome:RGD:1563030
Gene type: protein coding
RefSeq status: MODEL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Fam19a1; RGD1563030
Summary: Predicted to enable receptor ligand activity. Predicted to be involved in neuroblast differentiation; regulation of neuroblast proliferation; and regulation of signaling receptor activity. Predicted to be located in endoplasmic reticulum and extracellular space. Orthologous to human TAFA1 (TAFA chemokine like family member 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Brain (RPKM 60.1), Spleen (RPKM 18.8) and 4 other tissues See more
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	4	NC_086022.1 (130294659..130799139)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	4	NC_051339.1 (128738028..129244223)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	4	NC_005103.4 (128818468..128942088)

Chromosome 4 - NC_086022.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables receptor ligand activity	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in neuroblast differentiation	ISO Inferred from Sequence Orthology more info
involved_in regulation of neuroblast proliferation	ISO Inferred from Sequence Orthology more info
involved_in signal transduction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info
located_in endoplasmic reticulum	ISO Inferred from Sequence Orthology more info
located_in extracellular space	ISO Inferred from Sequence Orthology more info

Preferred Names: TAFA chemokine like family member 1; chemokine-like protein TAFA-1

Names: family with sequence similarity 19 (chemokine (C-C motif)-like), member A1; family with sequence similarity 19 member A1, C-C motif chemokine like

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The following sections contain reference sequences that belong to a specific genome build. Explain