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    Hist3h2ba histone cluster 3, H2ba [ Rattus norvegicus (Norway rat) ]

    Gene ID: 303175, updated on 29-Feb-2024

    Summary

    Official Symbol
    Hist3h2baprovided by RGD
    Official Full Name
    histone cluster 3, H2baprovided by RGD
    Primary source
    RGD:1307520
    See related
    Ensembl:ENSRNOG00000043419 AllianceGenome:RGD:1307520
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable DNA binding activity. Predicted to be involved in nucleosome assembly. Predicted to be located in nucleus. Predicted to be part of nucleosome. Orthologous to human H2BU1 (H2B.U histone 1). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See Hist3h2ba in Genome Data Viewer
    Location:
    10q22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (44225421..44226050)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (43725836..43726465)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (45289741..45290370)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene butyrophilin like 10 Neighboring gene ring finger protein 187 Neighboring gene H2B.U histone 1 Neighboring gene H2A clustered histone 25

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of chromatin IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of nucleosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    histone cluster 3, H2ba
    Names
    histone 3, H2ba

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001111127.1NP_001104597.1  histone cluster 3, H2ba

      See identical proteins and their annotated locations for NP_001104597.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473948
      UniProtKB/TrEMBL
      A6HEW3, A6KNB9, D3ZNZ9
      Related
      ENSRNOP00000060972.1, ENSRNOT00000066190.2
      Conserved Domains (1) summary
      cl23830
      Location:12125
      H2B; Histone H2B

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      44225421..44226050
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)