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    Sgk2 serum/glucocorticoid regulated kinase 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 171497, updated on 11-Apr-2024

    Summary

    Official Symbol
    Sgk2provided by RGD
    Official Full Name
    serum/glucocorticoid regulated kinase 2provided by RGD
    Primary source
    RGD:620232
    See related
    Ensembl:ENSRNOG00000033573 AllianceGenome:RGD:620232
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable potassium channel regulator activity and protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to be located in nucleoplasm. Orthologous to human SGK2 (serum/glucocorticoid regulated kinase 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Kidney (RPKM 199.8) and Liver (RPKM 84.1) See more
    Orthologs
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    Genomic context

    See Sgk2 in Genome Data Viewer
    Location:
    3q42
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (172063625..172089000)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (151644102..151669480)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (159361313..159385843)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene serine and arginine rich splicing factor 6 Neighboring gene L3MBTL histone methyl-lysine binding protein 1 Neighboring gene uncharacterized LOC120101778 Neighboring gene intraflagellar transport 52 Neighboring gene 5S ribosomal RNA Neighboring gene MYB proto-oncogene like 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables potassium channel regulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables potassium channel regulator activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables potassium channel regulator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein serine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in peptidyl-serine phosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    serine/threonine-protein kinase Sgk2
    Names
    SGK2, serine/threonine kinase 2
    NP_604458.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134463.1NP_604458.1  serine/threonine-protein kinase Sgk2

      See identical proteins and their annotated locations for NP_604458.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474005
      UniProtKB/Swiss-Prot
      Q8R4U9
      UniProtKB/TrEMBL
      A0A8I6A9X9, A6JX11
      Related
      ENSRNOP00000081213.1, ENSRNOT00000108319.1
      Conserved Domains (2) summary
      smart00220
      Location:35292
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cl21453
      Location:39359
      PKc_like; Protein Kinases, catalytic domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      172063625..172089000
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)