U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ARID4B AT-rich interaction domain 4B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718320, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ARID4Bprovided by VGNC
    Official Full Name
    AT-rich interaction domain 4Bprovided by VGNC
    Primary source
    VGNC:VGNC:69831
    See related
    Ensembl:ENSMMUG00000007141
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ARID4B in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (13700125..13866810)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (211447543..211613864, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene beta-1,3-N-acetylgalactosaminyltransferase 2 Neighboring gene tubulin folding cofactor E Neighboring gene geranylgeranyl diphosphate synthase 1 Neighboring gene small nucleolar RNA SNORA14 Neighboring gene RNA binding motif protein 34 Neighboring gene translocase of outer mitochondrial membrane 20

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    AT-rich interactive domain-containing protein 4B
    Names
    AT rich interactive domain 4B (RBP1-like)

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      13700125..13866810
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126891.2 → XP_014982377.1  AT-rich interactive domain-containing protein 4B isoform X3

      UniProtKB/TrEMBL
      A0A5K1UJF2, F7DN95, H9FVQ8
      Related
      ENSMMUP00000069237.1, ENSMMUT00000106833.1
      Conserved Domains (3) summary
      smart00333
      Location:58 → 113
      TUDOR; Tudor domain
      cd16883
      Location:308 → 399
      ARID_ARID4B; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 4B (ARID4B) and similar proteins
      pfam08169
      Location:170 → 263
      RBB1NT; RBB1NT (NUC162) domain

    2. XM_015126853.2 → XP_014982339.1  AT-rich interactive domain-containing protein 4B isoform X1

      UniProtKB/TrEMBL
      A0A5K1UJF2, F7DN77, H9FVQ7
      Related
      ENSMMUP00000009359.3, ENSMMUT00000009970.4
      Conserved Domains (4) summary
      smart00333
      Location:58 → 113
      TUDOR; Tudor domain
      smart01014
      Location:311 → 394
      ARID; ARID/BRIGHT DNA binding domain
      pfam08169
      Location:170 → 262
      RBB1NT; RBB1NT (NUC162) domain
      pfam11717
      Location:572 → 625
      Tudor-knot; RNA binding activity-knot of a chromodomain

    3. XM_015126883.2 → XP_014982369.1  AT-rich interactive domain-containing protein 4B isoform X2

      UniProtKB/TrEMBL
      A0A5K1UJF2
      Conserved Domains (3) summary
      smart00333
      Location:58 → 113
      TUDOR; Tudor domain
      smart01014
      Location:311 → 394
      ARID; ARID/BRIGHT DNA binding domain
      pfam08169
      Location:170 → 262
      RBB1NT; RBB1NT (NUC162) domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.