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    GABPA GA binding protein transcription factor subunit alpha [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708312, updated on 5-Mar-2024

    Summary

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    Official Symbol
    GABPAprovided by VGNC
    Official Full Name
    GA binding protein transcription factor subunit alphaprovided by VGNC
    Primary source
    VGNC:VGNC:72844
    Locus tag
    EGK_13349
    See related
    Ensembl:ENSMMUG00000008727
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GABPA in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (20894100..20942468, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (21215326..21263755, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114676831 Neighboring gene protein LLP homolog pseudogene Neighboring gene ATP synthase peripheral stalk subunit F6 Neighboring gene junctional adhesion molecule 2 Neighboring gene mitochondrial ribosomal protein L39 Neighboring gene MIR155 host gene Neighboring gene microRNA mir-155

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GA-binding protein alpha chain
    Names
    GA binding protein transcription factor alpha subunit
    GA binding protein transcription factor, alpha subunit 60kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266585.1 → NP_001253514.1  GA-binding protein alpha chain

      See identical proteins and their annotated locations for NP_001253514.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046656
      UniProtKB/TrEMBL
      A0A8J8Y3P3, F7E124, G7MNB2, H9Z7C2
      Related
      ENSMMUP00000066819.1, ENSMMUT00000100354.1
      Conserved Domains (3) summary
      cd08534
      Location:168 → 254
      SAM_PNT-GABP-alpha; Sterile alpha motif (SAM)/Pointed domain of GA-binding protein (GABP) alpha chain
      smart00413
      Location:319 → 403
      ETS; erythroblast transformation specific domain
      pfam11620
      Location:40 → 119
      GABP-alpha; GA-binding protein alpha chain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      20894100..20942468 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015133053.2 → XP_014988539.1  GA-binding protein alpha chain isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y3P3, F7E124, G7MNB2, H9Z7C2
      Conserved Domains (3) summary
      cd08534
      Location:168 → 254
      SAM_PNT-GABP-alpha; Sterile alpha motif (SAM)/Pointed domain of GA-binding protein (GABP) alpha chain
      smart00413
      Location:319 → 403
      ETS; erythroblast transformation specific domain
      pfam11620
      Location:40 → 119
      GABP-alpha; GA-binding protein alpha chain

    2. XM_028844959.1 → XP_028700792.1  GA-binding protein alpha chain isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y3P3, F7E124, G7MNB2, H9Z7C2
      Conserved Domains (3) summary
      cd08534
      Location:168 → 254
      SAM_PNT-GABP-alpha; Sterile alpha motif (SAM)/Pointed domain of GA-binding protein (GABP) alpha chain
      smart00413
      Location:319 → 403
      ETS; erythroblast transformation specific domain
      pfam11620
      Location:40 → 119
      GABP-alpha; GA-binding protein alpha chain

    3. XM_028844961.1 → XP_028700794.1  GA-binding protein alpha chain isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y3P3, F7E124, G7MNB2, H9Z7C2
      Conserved Domains (3) summary
      cd08534
      Location:168 → 254
      SAM_PNT-GABP-alpha; Sterile alpha motif (SAM)/Pointed domain of GA-binding protein (GABP) alpha chain
      smart00413
      Location:319 → 403
      ETS; erythroblast transformation specific domain
      pfam11620
      Location:40 → 119
      GABP-alpha; GA-binding protein alpha chain

    4. XM_015133054.2 → XP_014988540.1  GA-binding protein alpha chain isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y3P3, F7E124, G7MNB2, H9Z7C2
      Conserved Domains (3) summary
      cd08534
      Location:168 → 254
      SAM_PNT-GABP-alpha; Sterile alpha motif (SAM)/Pointed domain of GA-binding protein (GABP) alpha chain
      smart00413
      Location:319 → 403
      ETS; erythroblast transformation specific domain
      pfam11620
      Location:40 → 119
      GABP-alpha; GA-binding protein alpha chain

    5. XM_015133055.2 → XP_014988541.1  GA-binding protein alpha chain isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y3P3, F7E124, G7MNB2, H9Z7C2
      Related
      ENSMMUP00000074746.1, ENSMMUT00000085044.1
      Conserved Domains (3) summary
      cd08534
      Location:168 → 254
      SAM_PNT-GABP-alpha; Sterile alpha motif (SAM)/Pointed domain of GA-binding protein (GABP) alpha chain
      smart00413
      Location:319 → 403
      ETS; erythroblast transformation specific domain
      pfam11620
      Location:40 → 119
      GABP-alpha; GA-binding protein alpha chain
    Nucleotide Protein
    Heading Accession and Version

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