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    C1h19orf33 similar to human chromosome 19 open reading frame 33 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100361913, updated on 13-Apr-2024

    Summary

    Official Symbol
    C1h19orf33provided by RGD
    Official Full Name
    similar to human chromosome 19 open reading frame 33provided by RGD
    Primary source
    RGD:2319167
    See related
    Ensembl:ENSRNOG00000056651 AllianceGenome:RGD:2319167
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in cytosol; nuclear lumen; and plasma membrane. Orthologous to human C19orf33 (chromosome 19 open reading frame 33). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Kidney (RPKM 81.1), Lung (RPKM 77.5) and 9 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See C1h19orf33 in Genome Data Viewer
    Location:
    1q21
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (93677305..93678141, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (84549830..84550666, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (88192493..88194085, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene MARCKS-related protein-like Neighboring gene cation channel sperm associated auxiliary subunit gamma Neighboring gene potassium two pore domain channel subfamily K member 6 Neighboring gene Yip1 interacting factor homolog B, membrane trafficking protein Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 14A Neighboring gene serine peptidase inhibitor, Kunitz type, 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    NOT enables double-stranded DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    NOT enables single-stranded DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    immortalization up-regulated protein
    Names
    immortalization up-regulated protein-like
    rCG54286-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001402286.2NP_001389215.1  immortalization up-regulated protein

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A6J9Q2, D3ZE02
      Related
      ENSRNOP00000027998.6, ENSRNOT00000027998.8

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      93677305..93678141 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)