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    Tcstv5a Tcstv family member 5A [ Mus musculus (house mouse) ]

    Gene ID: 333467, updated on 12-Mar-2024

    Summary

    Official Symbol
    Tcstv5aprovided by MGI
    Official Full Name
    Tcstv family member 5Aprovided by MGI
    Primary source
    MGI:MGI:3588226
    See related
    Ensembl:ENSMUSG00000078537 AllianceGenome:MGI:3588226
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tcstv5; B020031M17Rik
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Tcstv5a in Genome Data Viewer
    Location:
    13; 13 D2.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (120410893..120412342, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (119949357..119950806, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene 2 cell stage variable group member 2B Neighboring gene predicted gene, 21181 Neighboring gene predicted gene, 20784 Neighboring gene annexin 2 receptor-like pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC333467
    Names
    Tcstv family member 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033769.2NP_001028941.1  uncharacterized protein LOC333467

      See identical proteins and their annotated locations for NP_001028941.1

      Status: PREDICTED

      Source sequence(s)
      AK139881
      Consensus CDS
      CCDS56906.1
      UniProtKB/TrEMBL
      Q3UT11
      Related
      ENSMUSP00000137705.2, ENSMUST00000180768.2
      Conserved Domains (1) summary
      pfam07270
      Location:7157
      DUF1438; Protein of unknown function (DUF1438)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      120410893..120412342 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)