U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Rps24 ribosomal protein S24 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 81776, updated on 2-May-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Rps24provided by RGD
    Official Full Name
    ribosomal protein S24provided by RGD
    Primary source
    RGD:621040
    See related
    Ensembl:ENSRNOG00000010189 AllianceGenome:RGD:621040
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    L33
    Summary
    Enables translation initiation factor binding activity. Involved in liver regeneration. Part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-blackfan anemia 3. Orthologous to human RPS24 (ribosomal protein S24). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Spleen (RPKM 6559.3), Thymus (RPKM 5884.7) and 9 other tissues See more
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Rps24 in Genome Data Viewer
    Location:
    16p16
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (95429..101146)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (89538..94267)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (757390..762091)

    Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase III subunit A Neighboring gene uncharacterized LOC134482310 Neighboring gene uncharacterized LOC102551656 Neighboring gene spindlin-1-like Neighboring gene uncharacterized LOC120097431

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Differential display and cloning of messenger RNAs from the late phase of rat liver regeneration. Kar S, et al. Biochem Biophys Res Commun, 1995 Jul 6. PMID 7612009
    2. The primary structure of rat ribosomal protein S24. Chan YL, et al. FEBS Lett, 1990 Mar 26. PMID 2335205
    3. Mutation of ribosomal protein RPS24 in Diamond-Blackfan anemia results in a ribosome biogenesis disorder. Choesmel V, et al. Hum Mol Genet, 2008 May 1. PMID 18230666
    4. Ribosomal protein S24 gene is mutated in Diamond-Blackfan anemia. Gazda HT, et al. Am J Hum Genet, 2006 Dec. PMID 17186470, Free PMC Article
    5. Identification of proteins of the 40 S ribosomal subunit involved in interaction with initiation factor eIF-2 in the quaternary initiation complex by means of monospecific antibodies. Bommer UA, et al. FEBS Lett, 1988 Jun 6. PMID 3384085

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome ISO
    Inferred from Sequence Orthology
    more info
    		  
    contributes_to translation initiation factor activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    enables translation initiation factor binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in erythrocyte homeostasis ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in liver regeneration IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in rRNA processing ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in ribosomal small subunit biogenesis ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in ribosomal small subunit biogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in translational initiation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in cytosolic ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosolic ribosome ISO
    Inferred from Sequence Orthology
    more info
    		  
    part_of cytosolic small ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic small ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    part_of small ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    part_of small-subunit processome ISO
    Inferred from Sequence Orthology
    more info
    		  
    part_of small-subunit processome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in synapse ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    small ribosomal subunit protein eS24
    Names
    40S ribosomal protein S24

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_031112.1 → NP_112374.1  small ribosomal subunit protein eS24

      See identical proteins and their annotated locations for NP_112374.1

      Status: PROVISIONAL

      Source sequence(s)
      X52445
      UniProtKB/Swiss-Prot
      P62850, Q6PEC9
      UniProtKB/TrEMBL
      A0A0H2UHH9, A6KMF4
      Conserved Domains (1) summary
      PTZ00071
      Location:1 → 130
      PTZ00071; 40S ribosomal protein S24; Provisional

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086034.1 Reference GRCr8

      Range
      95429..101146
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063275776.1 → XP_063131846.1  small ribosomal subunit protein eS24 isoform X2

    2. XM_063275774.1 → XP_063131844.1  small ribosomal subunit protein eS24 isoform X1

      UniProtKB/TrEMBL
      A0A8I6A7A5

    3. XM_006252531.5 → XP_006252593.1  small ribosomal subunit protein eS24 isoform X3

      See identical proteins and their annotated locations for XP_006252593.1

      UniProtKB/TrEMBL
      A0A0H2UHH9, A6KMF6
      Related
      ENSRNOP00000082107.1
      Conserved Domains (1) summary
      PTZ00071
      Location:1 → 130
      PTZ00071; 40S ribosomal protein S24; Provisional

    4. XM_006252533.4 → XP_006252595.1  small ribosomal subunit protein eS24 isoform X4

      See identical proteins and their annotated locations for XP_006252595.1

      UniProtKB/TrEMBL
      A0A0H2UHH9, A6KMF5
      Related
      ENSRNOP00000013588.6
      Conserved Domains (1) summary
      PTZ00071
      Location:1 → 130
      PTZ00071; 40S ribosomal protein S24; Provisional

    5. XM_063275775.1 → XP_063131845.1  small ribosomal subunit protein eS24 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P62850.1 GenPept UniProtKB/Swiss-Prot:P62850

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous