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    Ecrg4 ECRG4 augurin precursor [ Mus musculus (house mouse) ]

    Gene ID: 78896, updated on 5-Mar-2024

    Summary

    Official Symbol
    Ecrg4provided by MGI
    Official Full Name
    ECRG4 augurin precursorprovided by MGI
    Primary source
    MGI:MGI:1926146
    See related
    Ensembl:ENSMUSG00000026051 AllianceGenome:MGI:1926146
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1500015O10Rik
    Summary
    Predicted to enable neuropeptide hormone activity. Acts upstream of or within G1 to G0 transition; anaphase-promoting complex-dependent catabolic process; and cellular senescence. Located in extracellular space. Is expressed in several structures, including adrenal gland; central nervous system; heart; skeleton; and urinary system. Orthologous to human ECRG4 (ECRG4 augurin precursor). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in adrenal adult (RPKM 16.3), ovary adult (RPKM 13.7) and 9 other tissues See more
    Orthologs
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    Genomic context

    Location:
    1 C1.1; 1 23.44 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (43769762..43781724)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (43730602..43742564)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_00790 Neighboring gene predicted gene, 38628 Neighboring gene predicted gene, 30634 Neighboring gene UDP-glucuronate decarboxylase 1 Neighboring gene STARR-positive B cell enhancer mm9_chr1:43834650-43834950 Neighboring gene STARR-positive B cell enhancer mm9_chr1:43835251-43835552 Neighboring gene enolase 1, alpha non-neuron pseudogene Neighboring gene ADP-ribosylation factor 1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (4)  1 citation
    • Endonuclease-mediated (4) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables neuropeptide hormone activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in G1 to G0 transition IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within G1 to G0 transition IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in anaphase-promoting complex-dependent catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within anaphase-promoting complex-dependent catabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cellular senescence IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within cellular senescence IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in central nervous system development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in central nervous system development ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in negative regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cell population proliferation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in neuropeptide signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of corticosterone secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of corticotropin secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of corticotropin-releasing hormone secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of cell population proliferation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in response to wounding ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to wounding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in vasopressin secretion ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in apical plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in apical plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in dense core granule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dense core granule ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    augurin
    Names
    esophageal cancer related gene 4 protein
    esophageal cancer-related gene 4 protein homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_024283.3NP_077245.2  augurin precursor

      See identical proteins and their annotated locations for NP_077245.2

      Status: PROVISIONAL

      Source sequence(s)
      AK049805
      Consensus CDS
      CCDS14925.1
      UniProtKB/Swiss-Prot
      Q99LS0, Q9D2U7
      Related
      ENSMUSP00000027217.9, ENSMUST00000027217.9
      Conserved Domains (1) summary
      pfam15187
      Location:32148
      Augurin; Oesophageal cancer-related gene 4

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      43769762..43781724
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)