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    Fam241b family with sequence similarity 241, member B [ Mus musculus (house mouse) ]

    Gene ID: 69894, updated on 5-Mar-2024

    Summary

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    Official Symbol
    Fam241bprovided by MGI
    Official Full Name
    family with sequence similarity 241, member Bprovided by MGI
    Primary source
    MGI:MGI:1917144
    See related
    Ensembl:ENSMUSG00000020083 AllianceGenome:MGI:1917144
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2010107G23Rik
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in central nervous system; dorsal root ganglion; epithelium; and submandibular gland primordium. Orthologous to human FAM241B (family with sequence similarity 241 member B). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in CNS E18 (RPKM 22.5), CNS E14 (RPKM 13.4) and 19 other tissues See more
    Orthologs
    human all
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    Genomic context

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    See Fam241b in Genome Data Viewer
    Location:
    10 B4; 10 32.34 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (61943435..61946829, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (62107656..62111050, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene collagen, type XIII, alpha 1 Neighboring gene STARR-seq mESC enhancer starr_26865 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene STARR-seq mESC enhancer starr_26870 Neighboring gene STARR-seq mESC enhancer starr_26872 Neighboring gene argininosuccinate synthase pseudogene Neighboring gene STARR-seq mESC enhancer starr_26874 Neighboring gene neurogenin 3 Neighboring gene STARR-positive B cell enhancer mm9_chr10:61645889-61646190 Neighboring gene tetraspanin 15 Neighboring gene microRNA 7662

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Integrating genetic and network analysis to characterize genes related to mouse weight. Ghazalpour A, et al. PLoS Genet, 2006 Aug 18. PMID 16934000, Free PMC Article
    2. Protein-protein interaction panel using mouse full-length cDNAs. Suzuki H, et al. Genome Res, 2001 Oct. PMID 11591653, Free PMC Article
    3. Identification of transcripts with enriched expression in the developing and adult pancreas. Hoffman BG, et al. Genome Biol, 2008. PMID 18554416, Free PMC Article
    4. Database resources of the National Center for Biotechnology Information. Wheeler DL, et al. Nucleic Acids Res, 2001 Jan 1. PMID 11125038, Free PMC Article
    5. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein FAM241B
    Names
    uncharacterized protein C10orf35 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001358252.1 → NP_001345181.1  protein FAM241B

      Status: VALIDATED

      Source sequence(s)
      AC127417, AK008338, AK035688, DN174360
      Consensus CDS
      CCDS23886.1
      UniProtKB/Swiss-Prot
      Q9D882
      UniProtKB/TrEMBL
      D3YYX8
      Related
      ENSMUSP00000116424.2, ENSMUST00000142796.8
      Conserved Domains (1) summary
      pfam15378
      Location:62 → 91
      DUF4605; Domain of unknown function (DUF4605)

    2. NM_001358253.1 → NP_001345182.1  protein FAM241B

      Status: VALIDATED

      Source sequence(s)
      AC127417
      Consensus CDS
      CCDS23886.1
      UniProtKB/Swiss-Prot
      Q9D882
      UniProtKB/TrEMBL
      D3YYX8
      Related
      ENSMUSP00000118912.2, ENSMUST00000124615.8
      Conserved Domains (1) summary
      pfam15378
      Location:62 → 91
      DUF4605; Domain of unknown function (DUF4605)

    3. NM_027251.4 → NP_081527.1  protein FAM241B

      See identical proteins and their annotated locations for NP_081527.1

      Status: VALIDATED

      Source sequence(s)
      AK035688, DN174360
      Consensus CDS
      CCDS23886.1
      UniProtKB/Swiss-Prot
      Q9D882
      UniProtKB/TrEMBL
      D3YYX8
      Related
      ENSMUSP00000115865.2, ENSMUST00000125704.8
      Conserved Domains (1) summary
      pfam15378
      Location:62 → 91
      DUF4605; Domain of unknown function (DUF4605)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      61943435..61946829 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9D882.1 GenPept UniProtKB/Swiss-Prot:Q9D882

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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