U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    5430401F13Rik RIKEN cDNA 5430401F13 gene [ Mus musculus (house mouse) ]

    Gene ID: 71392, updated on 8-Feb-2024

    Summary

    Official Symbol
    5430401F13Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 5430401F13 geneprovided by MGI
    Primary source
    MGI:MGI:1918642
    See related
    Ensembl:ENSMUSG00000094113 AllianceGenome:MGI:1918642
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See 5430401F13Rik in Genome Data Viewer
    Location:
    6 F3; 6 63.44 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (131520725..131530720)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (131543762..131553757)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene ring finger and WD repeat domain 2 pseudogene Neighboring gene predicted gene 6619 Neighboring gene STARR-positive B cell enhancer mm9_chr6:131463198-131463499 Neighboring gene STARR-seq mESC enhancer starr_17499 Neighboring gene STARR-seq mESC enhancer starr_17500 Neighboring gene high mobility group box 1-like Neighboring gene taste receptor, type 2, member 130

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC71392

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001244628.1NP_001231557.1  uncharacterized protein LOC71392 precursor

      Status: VALIDATED

      Source sequence(s)
      AC124506, AK017253
      Consensus CDS
      CCDS57458.1
      UniProtKB/TrEMBL
      E9Q328, F7D4R8, Q9D3N7
      Related
      ENSMUSP00000125129.3, ENSMUST00000161385.5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      131520725..131530720
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)