U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Mfsd4b2l1 major facilitator superfamily domain containing 4B2 like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 309809, updated on 13-Apr-2024

    Summary

    Official Symbol
    Mfsd4b2l1provided by RGD
    Official Full Name
    major facilitator superfamily domain containing 4B2 like 1provided by RGD
    Primary source
    RGD:1310495
    See related
    Ensembl:ENSRNOG00000000589 AllianceGenome:RGD:1310495
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1310495
    Summary
    Predicted to enable glucose transmembrane transporter activity. Predicted to be involved in glucose transmembrane transport. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Kidney (RPKM 401.9) and Liver (RPKM 111.5) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    20q12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (44991384..45004590, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (43436857..43450064, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (45119102..45138663, complement)

    Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 4B2 like 2 Neighboring gene Na+ dependent glucose transporter 1 Neighboring gene solute carrier family 16 member 10 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene small nucleolar RNA, H/ACA box 69

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables glucose transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in glucose transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    similar to KIAA1919 protein
    Names
    sodium-dependent glucose transporter 1A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001402077.1NP_001389006.1  similar to KIAA1919 protein

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020
      UniProtKB/TrEMBL
      A6KIH9
      Related
      ENSRNOP00000084459.1, ENSRNOT00000107452.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086038.1 Reference GRCr8

      Range
      44991384..45004590 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)