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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001107704.2 → NP_001101174.2 chromodomain-helicase-DNA-binding protein 1-like
Status: VALIDATED
- Source sequence(s)
-
JAXUCZ010000002
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086020.1 Reference GRCr8
- Range
-
187819869..187906359 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_063281902.1 → XP_063137972.1 chromodomain-helicase-DNA-binding protein 1-like isoform X1
-
XM_063281904.1 → XP_063137974.1 chromodomain-helicase-DNA-binding protein 1-like isoform X3
- UniProtKB/TrEMBL
-
D4ACG6
-
XM_008761354.4 → XP_008759576.1 chromodomain-helicase-DNA-binding protein 1-like isoform X5
See identical proteins and their annotated locations for XP_008759576.1
- UniProtKB/TrEMBL
-
A0A8I5ZYW5
- Conserved Domains (4) summary
-
- cd00046
Location:1 → 133
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam00176
Location:1 → 256
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:274 → 387
- Helicase_C; Helicase conserved C-terminal domain
- cl00019
Location:648 → 798
- Macro; Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ...
-
XM_008761353.4 → XP_008759575.1 chromodomain-helicase-DNA-binding protein 1-like isoform X4
See identical proteins and their annotated locations for XP_008759575.1
- UniProtKB/TrEMBL
- A0A8I5ZYW5, A0A8I6A8B4
- Related
-
ENSRNOP00000086360.1
- Conserved Domains (4) summary
-
- cd00046
Location:90 → 230
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam00176
Location:74 → 353
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:371 → 484
- Helicase_C; Helicase conserved C-terminal domain
- cl00019
Location:745 → 852
- Macro; Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ...
-
XM_008761350.4 → XP_008759572.1 chromodomain-helicase-DNA-binding protein 1-like isoform X2
See identical proteins and their annotated locations for XP_008759572.1
- UniProtKB/TrEMBL
-
A0A8I5ZYW5
- Related
-
ENSRNOP00000084164.1
- Conserved Domains (4) summary
-
- cd00046
Location:90 → 230
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam00176
Location:74 → 353
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:371 → 484
- Helicase_C; Helicase conserved C-terminal domain
- cl00019
Location:745 → 895
- Macro; Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ...
-
XM_039103801.2 → XP_038959729.1 chromodomain-helicase-DNA-binding protein 1-like isoform X6
- UniProtKB/TrEMBL
-
A0A8I5ZYW5
- Conserved Domains (2) summary
-
- PLN03142
Location:19 → 494
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd03331
Location:623 → 773
- Macro_Poa1p-like_SNF2; macrodomain, Poa1p-like family, SNF2 subfamily
-
XM_039103804.2 → XP_038959732.1 chromodomain-helicase-DNA-binding protein 1-like isoform X7
- UniProtKB/TrEMBL
-
A6K3B4
- Conserved Domains (2) summary
-
- PLN03142
Location:1 → 164
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd03331
Location:293 → 443
- Macro_Poa1p-like_SNF2; macrodomain, Poa1p-like family, SNF2 subfamily
RNA
-
XR_010063611.1 RNA Sequence
-
XR_005501136.2 RNA Sequence