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    Prl4a1 prolactin family 4, subfamily a, member 1 [ Mus musculus (house mouse) ]

    Gene ID: 19110, updated on 11-Apr-2024

    Summary

    Official Symbol
    Prl4a1provided by MGI
    Official Full Name
    prolactin family 4, subfamily a, member 1provided by MGI
    Primary source
    MGI:MGI:1206587
    See related
    Ensembl:ENSMUSG00000005891 AllianceGenome:MGI:1206587
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ghd23; PLP-A; Prlpa
    Summary
    Predicted to enable hormone activity and prolactin receptor binding activity. Acts upstream of or within response to hypoxia. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in decidua; ectoplacental cone; extraembryonic component; and placenta. Human ortholog(s) of this gene implicated in carotid artery disease. Orthologous to human PRL (prolactin). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward placenta adult (RPKM 133.5) See more
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    Genomic context

    Location:
    13 A3.1; 13 12.66 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (28200195..28207531)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (28016212..28023548)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_34019 Neighboring gene STARR-seq mESC enhancer starr_34020 Neighboring gene STARR-seq mESC enhancer starr_34021 Neighboring gene dynein, axonemal, heavy chain 9 pseudogene Neighboring gene STARR-seq mESC enhancer starr_34022 Neighboring gene lysophosphatidylcholine acyltransferase 4 pseudogene Neighboring gene STARR-seq mESC enhancer starr_34023 Neighboring gene STARR-seq mESC enhancer starr_34024 Neighboring gene STARR-seq mESC enhancer starr_34025 Neighboring gene prolactin family 5, subfamily a, member 1 Neighboring gene STARR-seq mESC enhancer starr_34026 Neighboring gene ribosomal protein S18, pseudogene 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2)  1 citation
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables prolactin receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables prolactin receptor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in female pregnancy IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mammary gland development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of cell population proliferation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of lactation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of receptor signaling pathway via JAK-STAT IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within response to hypoxia IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to nutrient levels IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    prolactin-4A1
    Names
    PRL-like protein A
    growth hormone d23
    placental prolactin-like protein A
    prolactin-like protein A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011165.4NP_035295.1  prolactin-4A1 precursor

      See identical proteins and their annotated locations for NP_035295.1

      Status: VALIDATED

      Source sequence(s)
      AK141285, BC052218
      Consensus CDS
      CCDS26409.1
      UniProtKB/Swiss-Prot
      O35256
      UniProtKB/TrEMBL
      A0A0M6L0M4
      Related
      ENSMUSP00000021779.7, ENSMUST00000021779.8
      Conserved Domains (1) summary
      cd10288
      Location:37227
      prolactin_like; Prolactin (PRL or PRL1), chorionic somatomammotropin, and related pituitary gland hormones

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      28200195..28207531
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)