MSX2 msh homeobox 2 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: MSX2provided by VGNC
Official Full Name: msh homeobox 2provided by VGNC
Primary source: VGNC:VGNC:84448
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	6	NC_041759.1 (172133074..172138050)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	6	NC_027898.1 (173026418..173031516)

Chromosome 6 - NC_041759.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

MSX2_1676 (e-PCR)
- UniSTS:277511

Msx2 (e-PCR), detects polymorphism
- UniSTS:516407

PMC164857P2 (e-PCR)
- UniSTS:271526

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in embryonic morphogenesis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: homeobox protein MSX-2; LOW QUALITY PROTEIN: homeobox protein MSX-2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001266492.1 → NP_001253421.1 homeobox protein MSX-2

See identical proteins and their annotated locations for NP_001253421.1

Status: PROVISIONAL

Source sequence(s)

JV044304

UniProtKB/TrEMBL

F7CDE7, I0FIU9

Conserved Domains (1) summary

pfam00046
Location:145 → 199

Homeobox; Homeobox domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041759.1 Reference Mmul_10 Primary Assembly

Range

172133074..172138050

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_028849924.1 → XP_028705757.1 LOW QUALITY PROTEIN: homeobox protein MSX-2

UniProtKB/TrEMBL

F7CDE7

Conserved Domains (1) summary

pfam00046
Location:145 → 199

Homeobox; Homeobox domain