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    cwn-1 Protein Wnt-1 [ Caenorhabditis elegans ]

    Gene ID: 173399, updated on 23-Nov-2023

    Summary

    Gene symbol
    cwn-1
    Gene description
    Protein Wnt-1
    Primary source
    WormBase:WBGene00000857
    Locus tag
    CELE_K10B4.6
    See related
    AllianceGenome:WB:WBGene00000857
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables receptor tyrosine kinase binding activity. Involved in several processes, including neuroblast migration; neuron migration; and positive regulation of cellular component movement. Predicted to be located in cytoplasm; extracellular region; and plasma membrane. Predicted to be active in extracellular space. Is expressed in several structures, including CAN; hypodermal cell; intestine; muscle cell; and somatic nervous system. Human ortholog(s) of this gene implicated in Fuhrmann syndrome; Mullerian aplasia and hyperandrogenism; Schinzel type phocomelia; and congenital diarrhea. Orthologous to several human genes including WNT4 (Wnt family member 4). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    Location:
    chromosome: II
    Exon count:
    8
    Sequence:
    Chromosome: II; NC_003280.10 (130983..133598, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Serpentine receptor class delta-3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Peroxidase

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables cytokine activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables frizzled binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables frizzled binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables receptor ligand activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables receptor tyrosine kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in Wnt signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in canonical Wnt signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cell fate commitment IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cell fate specification IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in generation of neurons IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in interneuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in interneuron migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in motor neuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in motor neuron migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in neuroblast migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in neuroblast migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neuron differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in neuron migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of anterior/posterior axon guidance IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of motor neuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of sensory neuron axon guidance IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in regulation of gene expression IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of vulval development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Protein Wnt-1
    NP_493668.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      130983..133598 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061267.5NP_493668.1  Protein Wnt-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493668.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34888
      Conserved Domains (1) summary
      smart00097
      Location:44372
      WNT1; found in Wnt-1

    RNA

    1. NR_132572.1 RNA Sequence

      Status: REVIEWED