U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Anxa3 annexin A3 [ Mus musculus (house mouse) ]

    Gene ID: 11745, updated on 11-Apr-2024

    Summary

    Official Symbol
    Anxa3provided by MGI
    Official Full Name
    annexin A3provided by MGI
    Primary source
    MGI:MGI:1201378
    See related
    Ensembl:ENSMUSG00000029484 AllianceGenome:MGI:1201378
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Anx3
    Summary
    Predicted to enable several functions, including calcium-dependent phospholipid binding activity; calcium-dependent protein binding activity; and phospholipase A2 inhibitor activity. Predicted to be involved in several processes, including neutrophil degranulation; positive regulation of endothelial cell migration; and regulation of nucleobase-containing compound metabolic process. Located in collagen-containing extracellular matrix. Is expressed in several structures, including Meckel's cartilage; brain meninges; cardiovascular system; hindlimb interdigital region; and rectum. Orthologous to human ANXA3 (annexin A3). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in bladder adult (RPKM 32.8), placenta adult (RPKM 31.7) and 23 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Anxa3 in Genome Data Viewer
    Location:
    5 E3; 5 47.29 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (96941257..96993825)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (96793385..96845968)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene Fraser extracellular matrix complex subunit 1 Neighboring gene STARR-seq mESC enhancer starr_13678 Neighboring gene predicted gene, 52781 Neighboring gene predicted gene, 32995 Neighboring gene STARR-seq mESC enhancer starr_13679 Neighboring gene STARR-positive B cell enhancer mm9_chr5:97283346-97283646 Neighboring gene predicted gene, 33100 Neighboring gene predicted gene, 24623

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (3)  1 citation
    • Endonuclease-mediated (3) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables calcium-dependent phospholipid binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calcium-dependent phospholipid binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables calcium-dependent protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables phosphatidylserine binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phospholipase A2 inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables phospholipase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in axon ISO
    Inferred from Sequence Orthology
    more info
     
    located_in collagen-containing extracellular matrix HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendrite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in neuronal cell body ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in phagocytic vesicle membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in specific granule ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in vesicle membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    annexin A3
    Names
    35-alpha calcimedin
    PAP-III
    annexin III
    annexin-3
    lipocortin III
    placental anticoagulant protein III
    NP_001407036.1
    NP_001407037.1
    NP_001407038.1
    NP_038498.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001420107.1NP_001407036.1  annexin A3 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC121829, AC121887
      UniProtKB/Swiss-Prot
      O35639, Q3UBI0
    2. NM_001420108.1NP_001407037.1  annexin A3 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC121829, AC121887
      UniProtKB/Swiss-Prot
      O35639, Q3UBI0
    3. NM_001420109.1NP_001407038.1  annexin A3 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC121829, AC121887
    4. NM_013470.3NP_038498.2  annexin A3 isoform 1

      See identical proteins and their annotated locations for NP_038498.2

      Status: VALIDATED

      Source sequence(s)
      AC121829, AC121887
      Consensus CDS
      CCDS51568.1
      UniProtKB/Swiss-Prot
      O35639, Q3UBI0
      UniProtKB/TrEMBL
      Q3TFK4, Q3U737, Q8C1X9
      Related
      ENSMUSP00000031447.8, ENSMUST00000031447.12
      Conserved Domains (1) summary
      pfam00191
      Location:94159
      Annexin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      96941257..96993825
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)