U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Prb1a proline-rich protein BstNI subfamily 1A [ Mus musculus (house mouse) ]

    Gene ID: 381833, updated on 8-Feb-2024

    Summary

    Official Symbol
    Prb1aprovided by MGI
    Official Full Name
    proline-rich protein BstNI subfamily 1Aprovided by MGI
    Primary source
    MGI:MGI:2681872
    See related
    Ensembl:ENSMUSG00000067543 AllianceGenome:MGI:2681872
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Prb1; Prpg2
    Summary
    Orthologous to human PRB2 (proline rich protein BstNI subfamily 2); PRB3 (proline rich protein BstNI subfamily 3); and PRB4 (proline rich protein BstNI subfamily 4). [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Prb1a in Genome Data Viewer
    Location:
    6 G1; 6 64.03 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (132183758..132187484, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (132206795..132210521, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene 4736 Neighboring gene STARR-seq mESC enhancer starr_17503 Neighboring gene cyclin-dependent kinase 4 pseudogene Neighboring gene DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene Neighboring gene cyclin-dependent kinase 4 pseudogene Neighboring gene STARR-seq mESC enhancer starr_17505 Neighboring gene proline-rich protein BstNI subfamily 1B

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    proline-rich protein BstNI subfamily 1A
    Names
    proline-rich protein BstNI subfamily 1
    proline-rich proteoglycan 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198669.1NP_941071.1  proline-rich protein BstNI subfamily 1A precursor

      See identical proteins and their annotated locations for NP_941071.1

      Status: PROVISIONAL

      Source sequence(s)
      BC011176
      Consensus CDS
      CCDS20614.1
      UniProtKB/TrEMBL
      Q91X93
      Related
      ENSMUSP00000085159.3, ENSMUST00000087853.4

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      132183758..132187484 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)