Commd2 COMM domain containing 2 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Commd2provided by MGI
Official Full Name: COMM domain containing 2provided by MGI
Primary source: MGI:MGI:1098806
See related: Ensembl:ENSMUSG00000036513 AllianceGenome:MGI:1098806
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: HSPC042; D3Ertd176e; 1190017G07Rik
Summary: Predicted to be located in cytoplasm. Orthologous to human COMMD2 (COMM domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in CNS E14 (RPKM 6.7), CNS E11.5 (RPKM 6.7) and 28 other tissues See more
Orthologs: human all
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Genomic context

Location:: 3 D; 3 27.94 cM

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	3	NC_000069.7 (57551770..57559105, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	3	NC_000069.6 (57644349..57651684, complement)

Chromosome 3 - NC_000069.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Targeted (1)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

RH126369 (e-PCR)
- UniSTS:163077

RH135840 (e-PCR)
- UniSTS:209838

NoName (e-PCR)
- UniSTS:234687

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: COMM domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_175095.4 → NP_780304.2 COMM domain-containing protein 2

See identical proteins and their annotated locations for NP_780304.2

Status: PROVISIONAL

Source sequence(s)

AK143821

Consensus CDS

CCDS17362.1

UniProtKB/Swiss-Prot

Q8BJI3, Q8BXC6

UniProtKB/TrEMBL

Q497T6

Related

ENSMUSP00000124819.2, ENSMUST00000160959.8

Conserved Domains (1) summary

cd04750
Location:26 → 190

Commd2; COMM_Domain containing protein 2. The COMM Domain is found at the C-terminus of a variety of proteins; presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in protein-protein interactions. Several ...