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    2610318N02Rik RIKEN cDNA 2610318N02 gene [ Mus musculus (house mouse) ]

    Gene ID: 70458, updated on 8-Feb-2024

    Summary

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    Official Symbol
    2610318N02Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2610318N02 geneprovided by MGI
    Primary source
    MGI:MGI:1917708
    See related
    Ensembl:ENSMUSG00000049916 AllianceGenome:MGI:1917708
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 698.7) See more
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    Genomic context

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    Location:
    16 A3; 16 10.61 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (16931262..16943080, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (17113398..17125202, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9426 Neighboring gene mitogen-activated protein kinase 1 Neighboring gene yippee like 1 Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 2 Neighboring gene STARR-positive B cell enhancer ABC_E9927 Neighboring gene STARR-positive B cell enhancer ABC_E7429 Neighboring gene STARR-positive B cell enhancer ABC_E214 Neighboring gene microRNA 130b Neighboring gene microRNA 301b Neighboring gene stromal cell-derived factor 2-like 1 Neighboring gene Rps20 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Isolation of novel tissue-specific genes from cDNA libraries representing the individual tissue constituents of the gastrulating mouse embryo. Harrison SM, et al. Development, 1995 Aug. PMID 7671812
    2. High-throughput discovery of novel developmental phenotypes. Dickinson ME, et al. Nature, 2016 Sep 22. PMID 27626380, Free PMC Article
    3. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
    4. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
    5. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC70458

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001358255.1 → NP_001345184.1  uncharacterized protein LOC70458

      Status: VALIDATED

      Source sequence(s)
      AK146836, BC039993, BY710145
      Consensus CDS
      CCDS37269.1
      UniProtKB/TrEMBL
      Q80VT5
      Related
      ENSMUSP00000156313.2, ENSMUST00000231681.2
      Conserved Domains (1) summary
      pfam07759
      Location:20 → 66
      DUF1615; Protein of unknown function (DUF1615)

    2. NM_183287.3 → NP_899110.2  uncharacterized protein LOC70458

      See identical proteins and their annotated locations for NP_899110.2

      Status: VALIDATED

      Source sequence(s)
      BC039993, BY710145
      Consensus CDS
      CCDS37269.1
      UniProtKB/TrEMBL
      Q80VT5
      Related
      ENSMUSP00000091026.7, ENSMUST00000093336.8
      Conserved Domains (1) summary
      pfam07759
      Location:20 → 66
      DUF1615; Protein of unknown function (DUF1615)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      16931262..16943080 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006522540.2 → XP_006522603.1  uncharacterized protein LOC70458 isoform X1

      See identical proteins and their annotated locations for XP_006522603.1

      UniProtKB/TrEMBL
      Q80VT5
      Conserved Domains (1) summary
      pfam07759
      Location:20 → 66
      DUF1615; Protein of unknown function (DUF1615)

    2. XM_030249273.1 → XP_030105133.1  uncharacterized protein LOC70458 isoform X2

      UniProtKB/TrEMBL
      A0A338P7G0
      Conserved Domains (1) summary
      pfam07759
      Location:20 → 66
      DUF1615; Protein of unknown function (DUF1615)

    3. XM_006522539.5 → XP_006522602.1  uncharacterized protein LOC70458 isoform X1

      See identical proteins and their annotated locations for XP_006522602.1

      UniProtKB/TrEMBL
      Q80VT5
      Conserved Domains (1) summary
      pfam07759
      Location:20 → 66
      DUF1615; Protein of unknown function (DUF1615)

    4. XM_006522537.3 → XP_006522600.1  uncharacterized protein LOC70458 isoform X1

      See identical proteins and their annotated locations for XP_006522600.1

      UniProtKB/TrEMBL
      Q80VT5
      Conserved Domains (1) summary
      pfam07759
      Location:20 → 66
      DUF1615; Protein of unknown function (DUF1615)

    5. XM_006522541.5 → XP_006522604.1  uncharacterized protein LOC70458 isoform X2

      UniProtKB/TrEMBL
      A0A338P7G0
      Related
      ENSMUSP00000156373.2, ENSMUST00000231558.2
      Conserved Domains (1) summary
      pfam07759
      Location:20 → 66
      DUF1615; Protein of unknown function (DUF1615)
    Nucleotide Protein Strain
    Heading Accession and Version

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