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    Mrpl35 mitochondrial ribosomal protein L35 [ Mus musculus (house mouse) ]

    Gene ID: 66223, updated on 5-Mar-2024

    Summary

    Official Symbol
    Mrpl35provided by MGI
    Official Full Name
    mitochondrial ribosomal protein L35provided by MGI
    Primary source
    MGI:MGI:1913473
    See related
    Ensembl:ENSMUSG00000052962 AllianceGenome:MGI:1913473
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1110066C01Rik
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Located in mitochondrion. Is expressed in several structures, including early conceptus; gonad; heart; liver; and metanephros. Orthologous to human MRPL35 (mitochondrial ribosomal protein L35). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in testis adult (RPKM 7.1), heart adult (RPKM 6.3) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mrpl35 in Genome Data Viewer
    Location:
    6 C1; 6 32.21 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (71789981..71800768, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (71812997..71823784, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_16266 Neighboring gene ribosomal protein L19, pseudogene 9 Neighboring gene receptor accessory protein 1 Neighboring gene STARR-seq mESC enhancer starr_16267 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:71707276-71707477 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:71707656-71707839 Neighboring gene STARR-seq mESC enhancer starr_16268 Neighboring gene inner membrane protein, mitochondrial Neighboring gene ribosomal protein L7A pseudogene Neighboring gene small nucleolar RNA, C/D box 94 Neighboring gene pentatricopeptide repeat domain 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in mitochondrial translation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    part_of mitochondrial large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    part_of mitochondrial large ribosomal subunit NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    large ribosomal subunit protein bL35m
    Names
    39S ribosomal protein L35, mitochondrial
    L35mt
    MRP-L35

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025430.3NP_079706.1  large ribosomal subunit protein bL35m

      See identical proteins and their annotated locations for NP_079706.1

      Status: VALIDATED

      Source sequence(s)
      AC122200, AK004385, BB615775
      Consensus CDS
      CCDS20234.1
      UniProtKB/Swiss-Prot
      Q9CQL6
      Related
      ENSMUSP00000066493.3, ENSMUST00000065103.4
      Conserved Domains (1) summary
      pfam01632
      Location:102161
      Ribosomal_L35p; Ribosomal protein L35

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      71789981..71800768 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)