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    Myh4 myosin, heavy polypeptide 4, skeletal muscle [ Mus musculus (house mouse) ]

    Gene ID: 17884, updated on 11-Apr-2024

    Summary

    Official Symbol
    Myh4provided by MGI
    Official Full Name
    myosin, heavy polypeptide 4, skeletal muscleprovided by MGI
    Primary source
    MGI:MGI:1339713
    See related
    Ensembl:ENSMUSG00000057003 AllianceGenome:MGI:1339713
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MM; MHC2B; Myhsf; MYH-2B; Minmus; Minimsc; MyHC-IIb
    Summary
    Predicted to enable double-stranded RNA binding activity. Acts upstream of or within response to activity. Predicted to be located in myofibril. Predicted to be part of myosin complex. Is expressed in several structures, including brown fat; diaphragm; heart; limb segment; and skeletal musculature. Orthologous to human MYH4 (myosin heavy chain 4). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward mammary gland adult (RPKM 118.7) See more
    Orthologs
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    Genomic context

    See Myh4 in Genome Data Viewer
    Location:
    11 B3; 11 40.59 cM
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (67128638..67151273)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (67237812..67260447)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene myosin, heavy polypeptide 2, skeletal muscle, adult Neighboring gene myosin, heavy polypeptide 1, skeletal muscle, adult Neighboring gene myosin heavy chain gene antisense RNA Neighboring gene STARR-seq mESC enhancer starr_29797 Neighboring gene myosin, heavy polypeptide 8, skeletal muscle, perinatal Neighboring gene nuclear encoded tRNA proline 2 (anticodon TGG) Neighboring gene STARR-seq mESC enhancer starr_29799 Neighboring gene myosin, heavy polypeptide 13, skeletal muscle Neighboring gene predicted gene, 40029

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables cytoskeletal motor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables double-stranded RNA binding ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    enables microfilament motor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in muscle contraction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within response to activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in myofibril ISO
    Inferred from Sequence Orthology
    more info
     
    part_of myosin II complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in myosin filament IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    myosin-4
    Names
    myHC-2b
    myosin heavy chain 2b
    myosin heavy chain 4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010855.3NP_034985.2  myosin-4

      See identical proteins and their annotated locations for NP_034985.2

      Status: VALIDATED

      Source sequence(s)
      AK138608, AL596129
      Consensus CDS
      CCDS24856.1
      UniProtKB/Swiss-Prot
      B9EJ73, Q5SX39
      UniProtKB/TrEMBL
      B2RWX0
      Related
      ENSMUSP00000018632.5, ENSMUST00000018632.11
      Conserved Domains (3) summary
      cd14915
      Location:100770
      MYSc_Myh4; class II myosin heavy chain 4, motor domain
      pfam02736
      Location:3573
      Myosin_N; Myosin N-terminal SH3-like domain
      cl25732
      Location:8501927
      SMC_N; RecF/RecN/SMC N terminal domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      67128638..67151273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)