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    Ceacam19 CEA cell adhesion molecule 19 [ Mus musculus (house mouse) ]

    Gene ID: 319930, updated on 5-Mar-2024

    Summary

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    Official Symbol
    Ceacam19provided by MGI
    Official Full Name
    CEA cell adhesion molecule 19provided by MGI
    Primary source
    MGI:MGI:2443001
    See related
    Ensembl:ENSMUSG00000049848 AllianceGenome:MGI:2443001
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CEAL1; C130022P09Rik
    Summary
    Orthologous to human CEACAM19 (CEA cell adhesion molecule 19). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in stomach adult (RPKM 1.7), limb E14.5 (RPKM 0.7) and 5 other tissues See more
    Orthologs
    human all
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    Genomic context

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    Location:
    7 A3; 7 9.95 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (19609667..19621915, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (19875742..19887990, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34891 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:20426963-20427193 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:20429933-20430166 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:20430230-20430572 Neighboring gene STARR-positive B cell enhancer ABC_E6521 Neighboring gene CEA cell adhesion molecule 16 Neighboring gene predicted gene, 19345 Neighboring gene STARR-positive B cell enhancer ABC_E11343 Neighboring gene STARR-seq mESC enhancer starr_18229 Neighboring gene poliovirus receptor Neighboring gene ribosomal protein L14 pseudogene Neighboring gene predicted gene 16251

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Identification of a novel group of evolutionarily conserved members within the rapidly diverging murine Cea family. Zebhauser R, et al. Genomics, 2005 Nov. PMID 16139472
    2. A mouse knockout library for secreted and transmembrane proteins. Tang T, et al. Nat Biotechnol, 2010 Jul. PMID 20562862
    3. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC130130, MGC130155, MGC130156

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    carcinoembryonic antigen-related cell adhesion molecule 19
    Names
    CEA-related cell adhesion molecule 19
    carcinoembryonic antigen-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177036.5 → NP_796010.1  carcinoembryonic antigen-related cell adhesion molecule 19 precursor

      See identical proteins and their annotated locations for NP_796010.1

      Status: PROVISIONAL

      Source sequence(s)
      AC149085
      Consensus CDS
      CCDS20915.1
      UniProtKB/TrEMBL
      Q3TQ88
      Related
      ENSMUSP00000057433.8, ENSMUST00000052605.8
      Conserved Domains (1) summary
      cl11960
      Location:35 → 119
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      19609667..19621915 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006540063.2 → XP_006540126.1  carcinoembryonic antigen-related cell adhesion molecule 19 isoform X1

      Conserved Domains (1) summary
      cl11960
      Location:35 → 119
      Ig; Immunoglobulin domain

    2. XM_006540064.1 → XP_006540127.1  carcinoembryonic antigen-related cell adhesion molecule 19 isoform X2

      Conserved Domains (1) summary
      cl11960
      Location:35 → 119
      Ig; Immunoglobulin domain

    3. XM_006540066.3 → XP_006540129.1  carcinoembryonic antigen-related cell adhesion molecule 19 isoform X3

      Conserved Domains (1) summary
      cl11960
      Location:35 → 119
      Ig; Immunoglobulin domain
    Nucleotide Protein Strain
    Heading Accession and Version

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