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    Vmn1r41 vomeronasal 1 receptor 41 [ Mus musculus (house mouse) ]

    Gene ID: 113857, updated on 8-Feb-2024

    Summary

    Official Symbol
    Vmn1r41provided by MGI
    Official Full Name
    vomeronasal 1 receptor 41provided by MGI
    Primary source
    MGI:MGI:2148520
    See related
    Ensembl:ENSMUSG00000094586 AllianceGenome:MGI:2148520
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1rb9; V1ra12
    Summary
    Predicted to enable signaling receptor activity. Predicted to act upstream of or within sensory perception of chemical stimulus. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to several human genes including VN1R17P (vomeronasal 1 receptor 17 pseudogene). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See Vmn1r41 in Genome Data Viewer
    Location:
    6 D1; 6 40.02 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (89717870..89724396)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (89740888..89747414)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor, pseudogene 25 Neighboring gene vomeronasal 1 receptor 40 Neighboring gene vomeronasal 1 receptor, pseudogene 26 Neighboring gene STARR-seq mESC enhancer starr_16606 Neighboring gene vomeronasal 1 receptor, pseudogene 27

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables pheromone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables signaling receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    vomeronasal type-1 receptor 41
    Names
    vomernasal 1 receptor Vmn1r41
    vomeronasal receptor 1 A12
    vomeronasal type-1 receptor B9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053230.2NP_444460.2  vomeronasal type-1 receptor 41

      See identical proteins and their annotated locations for NP_444460.2

      Status: VALIDATED

      Source sequence(s)
      AC051638
      Consensus CDS
      CCDS57438.1
      UniProtKB/Swiss-Prot
      Q8VIC4, Q9EQ44
      UniProtKB/TrEMBL
      A0A0N4SVQ3
      Related
      ENSMUSP00000145199.2, ENSMUST00000204949.3
      Conserved Domains (1) summary
      pfam03402
      Location:40303
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      89717870..89724396
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)