U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    DGK4 diacylglycerol kinase 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835876, updated on 15-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    DGK4
    Gene description
    diacylglycerol kinase 4
    Primary source
    Araport:AT5G57690
    Locus tag
    AT5G57690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATDGK4; diacylglycerol kinase 4; MRI1.5; MRI1_5
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (23371675..23374676, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene glutamine dumper 3 Neighboring gene ncRNA Neighboring gene BNR/Asp-box repeat family protein Neighboring gene Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Arabidopsis DIACYLGLYCEROL KINASE4 is involved in nitric oxide-dependent pollen tube guidance and fertilization. Wong A, et al. Development, 2020 Apr 27. PMID 32220864
    2. A role for diacylglycerol kinase 4 in signalling crosstalk during Arabidopsis pollen tube growth. Vaz Dias F, et al. New Phytol, 2019 May. PMID 30628082
    3. A Pair of Arabidopsis Diacylglycerol Kinases Essential for Gametogenesis and Endoplasmic Reticulum Phospholipid Metabolism in Leaves and Flowers. Angkawijaya AE, et al. Plant Cell, 2020 Aug. PMID 32471859, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A Pair of Arabidopsis Diacylglycerol Kinases Essential for Gametogenesis and Endoplasmic Reticulum Phospholipid Metabolism in Leaves and Flowers.
      Title: A Pair of Arabidopsis Diacylglycerol Kinases Essential for Gametogenesis and Endoplasmic Reticulum Phospholipid Metabolism in Leaves and Flowers.
    2. Arabidopsis DIACYLGLYCEROL KINASE4 is involved in nitric oxide-dependent pollen tube guidance and fertilization.
      Title: Arabidopsis DIACYLGLYCEROL KINASE4 is involved in nitric oxide-dependent pollen tube guidance and fertilization.
    3. the function of the Arabidopsis gene encoding DGK4, which is highly expressed in pollen, was investigated.
      Title: A role for diacylglycerol kinase 4 in signalling crosstalk during Arabidopsis pollen tube growth.
    Submit: New GeneRIF Correction

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP-dependent diacylglycerol kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein kinase C-activating G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    diacylglycerol kinase 4
    NP_200577.2
    • diacylglycerol kinase 4 (DGK4); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1594 Blast hits to 1405 proteins in 208 species: Archae - 0; Bacteria - 147; Metazoa - 1020; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23371675..23374676 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125152.3 → NP_200577.2  diacylglycerol kinase 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200577.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q1PDI2, Q9FHH4
      UniProtKB/TrEMBL
      A0A178UMM1, A0A5S9YF64
      Conserved Domains (2) summary
      pfam00609
      Location:282 → 459
      DAGK_acc; Diacylglycerol kinase accessory domain
      pfam00781
      Location:90 → 230
      DAGK_cat; Diacylglycerol kinase catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1PDI2.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Tools