U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Zfp512 zinc finger protein 512 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 313906, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Zfp512provided by RGD
    Official Full Name
    zinc finger protein 512provided by RGD
    Primary source
    RGD:1561526
    See related
    Ensembl:ENSRNOG00000039815 AllianceGenome:RGD:1561526
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Znf512; RGD1561526
    Summary
    Orthologous to human ZNF512 (zinc finger protein 512). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Brain (RPKM 105.1), Lung (RPKM 85.5) and 9 other tissues See more
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Zfp512 in Genome Data Viewer
    Location:
    6q14
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (30696889..30727895, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (24976903..25007913, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (26284749..26314841, complement)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene GPN-loop GTPase 1 Neighboring gene coiled-coil domain containing 121 Neighboring gene SPATA31 subfamily H member 1 Neighboring gene glucokinase regulator

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger protein 512

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      30696889..30727895 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006239836.5 → XP_006239898.2  zinc finger protein 512 isoform X2

      See identical proteins and their annotated locations for XP_006239898.2

      UniProtKB/TrEMBL
      A0A8I5YC41
      Related
      ENSRNOP00000077996.1
      Conserved Domains (1) summary
      COG5189
      Location:407 → 463
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

    2. XM_006239834.5 → XP_006239896.1  zinc finger protein 512 isoform X1

      See identical proteins and their annotated locations for XP_006239896.1

      UniProtKB/TrEMBL
      A0A8I5YC41, D3ZIF0
      Related
      ENSRNOP00000006658.5
      Conserved Domains (1) summary
      COG5189
      Location:409 → 465
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

    3. XM_039113088.2 → XP_038969016.1  zinc finger protein 512 isoform X3

      UniProtKB/TrEMBL
      A6HA54
      Conserved Domains (1) summary
      COG5189
      Location:255 → 311
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous