ABLIM3 actin binding LIM protein family member 3 [Gallus gallus (chicken)] - Gene

Summary

Symbol: ABLIM3provided by CGNC
Full Name: actin binding LIM protein family member 3provided by CGNC
Primary source: CGNC:2013
See related: Ensembl:ENSGALG00010012297
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 13

Exon count:: 25

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	13	NC_052544.1 (8162892..8198082, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	13	NC_052585.1 (8167984..8203250, complement)

Chromosome 13 - NC_052544.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables actin filament binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in cilium assembly	IEA Inferred from Electronic Annotation more info	PubMed
involved_in cytoskeleton organization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in lamellipodium assembly	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in actin cytoskeleton	IEA Inferred from Electronic Annotation more info	PubMed
located_in stress fiber	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: actin-binding LIM protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

8162892..8198082 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015293686.4 → XP_015149172.1 actin-binding LIM protein 3 isoform X3

UniProtKB/TrEMBL

A0A8V0Y8U4, A0A8V0YF19

Related

ENSGALP00010017113.1, ENSGALT00010029453.1

Conserved Domains (6) summary

smart00153
Location:652 → 687

VHP; Villin headpiece domain

cd09327
Location:23 → 74

LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins

cd09328
Location:79 → 134

LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins

cd09329
Location:151 → 202

LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins

cd09330
Location:210 → 265

LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins

pfam16182
Location:273 → 651

AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
XM_015293685.4 → XP_015149171.1 actin-binding LIM protein 3 isoform X2

UniProtKB/TrEMBL

A0A8V0Y8U4

Conserved Domains (6) summary

smart00153
Location:653 → 688

VHP; Villin headpiece domain

cd09327
Location:24 → 75

LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins

cd09328
Location:80 → 135

LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins

cd09329
Location:152 → 203

LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins

cd09330
Location:211 → 266

LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins

pfam16182
Location:274 → 652

AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
XM_046900521.1 → XP_046756477.1 actin-binding LIM protein 3 isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

8167984..8203250 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040682599.2 → XP_040538533.1 actin-binding LIM protein 3 isoform X3

UniProtKB/TrEMBL

A0A8V0Y8U4, A0A8V0YF19

Conserved Domains (6) summary

smart00153
Location:652 → 687

VHP; Villin headpiece domain

cd09327
Location:23 → 74

LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins

cd09328
Location:79 → 134

LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins

cd09329
Location:151 → 202

LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins

cd09330
Location:210 → 265

LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins

pfam16182
Location:273 → 651

AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
XM_040682598.2 → XP_040538532.1 actin-binding LIM protein 3 isoform X2

UniProtKB/TrEMBL

A0A8V0Y8U4

Conserved Domains (6) summary

smart00153
Location:653 → 688

VHP; Villin headpiece domain

cd09327
Location:24 → 75

LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins

cd09328
Location:80 → 135

LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins

cd09329
Location:152 → 203

LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins

cd09330
Location:211 → 266

LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins

pfam16182
Location:274 → 652

AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
XM_046927170.1 → XP_046783126.1 actin-binding LIM protein 3 isoform X1