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    Slc34a2 solute carrier family 34 (sodium phosphate), member 2 [ Mus musculus (house mouse) ]

    Gene ID: 20531, updated on 21-Apr-2024

    Summary

    Official Symbol
    Slc34a2provided by MGI
    Official Full Name
    solute carrier family 34 (sodium phosphate), member 2provided by MGI
    Primary source
    MGI:MGI:1342284
    See related
    Ensembl:ENSMUSG00000029188 AllianceGenome:MGI:1342284
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Npt2b; NaPi-2b; D5Ertd227e
    Summary
    Enables sodium:phosphate symporter activity. Acts upstream of or within in utero embryonic development and phosphate ion transport. Located in apical plasma membrane and brush border. Is expressed in several structures, including egg cylinder; genitourinary system; small intestine; and tooth. Human ortholog(s) of this gene implicated in pulmonary alveolar microlithiasis. Orthologous to human SLC34A2 (solute carrier family 34 member 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in lung adult (RPKM 498.2), large intestine adult (RPKM 142.1) and 1 other tissue See more
    Orthologs
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    Genomic context

    Location:
    5 C1; 5 28.92 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (53206695..53229006)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (53049353..53071664)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 5033403H07 gene Neighboring gene predicted gene, 23532 Neighboring gene predicted gene, 30301 Neighboring gene STARR-seq mESC enhancer starr_13073 Neighboring gene predicted gene 17182 Neighboring gene sel-1 suppressor of lin-12-like 3 (C. elegans) Neighboring gene STARR-seq mESC enhancer starr_13074 Neighboring gene predicted gene, 54298 Neighboring gene predicted gene, 30464

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (5)  1 citation
    • Endonuclease-mediated (3) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables phosphate ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein domain specific binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables sodium ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables sodium:phosphate symporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sodium:phosphate symporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables sodium:phosphate symporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in apical plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in apical plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in brush border IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in brush border IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in brush border membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in microvillus membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    sodium-dependent phosphate transport protein 2B
    Names
    Na(+)-dependent phosphate cotransporter 2B
    Na(+)/Pi cotransporter 2B
    sodium-phosphate transport protein 2B
    sodium/phosphate cotransporter 2B
    solute carrier family 34 member 2
    type IIb Na/Picotransporter

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011402.3NP_035532.2  sodium-dependent phosphate transport protein 2B

      See identical proteins and their annotated locations for NP_035532.2

      Status: VALIDATED

      Source sequence(s)
      AK004832, AK145599, BB873139, CJ097638, CJ205572
      Consensus CDS
      CCDS19291.1
      UniProtKB/Swiss-Prot
      Q9DBP0, Q9Z290
      Related
      ENSMUSP00000092380.5, ENSMUST00000094787.8
      Conserved Domains (2) summary
      TIGR01013
      Location:105604
      2a58; Phosphate:Na+ Symporter (PNaS) Family
      pfam02690
      Location:110201
      Na_Pi_cotrans; Na+/Pi-cotransporter

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      53206695..53229006
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)