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    Mpped1 metallophosphoesterase domain containing 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 362971, updated on 3-Apr-2024

    Summary

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    Official Symbol
    Mpped1provided by RGD
    Official Full Name
    metallophosphoesterase domain containing 1provided by RGD
    Primary source
    RGD:1308244
    See related
    Ensembl:ENSRNOG00000010834 AllianceGenome:RGD:1308244
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1308244
    Summary
    Predicted to enable hydrolase activity. Orthologous to human MPPED1 (metallophosphoesterase domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Brain (RPKM 192.6) and Spleen (RPKM 14.4) See more
    Orthologs
    human mouse all
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    Genomic context

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    See Mpped1 in Genome Data Viewer
    Location:
    7q34
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (116811841..116891789)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (114932221..115011797)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (124675087..124751408)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134479949 Neighboring gene signal peptide, CUB domain and EGF like domain containing 1 Neighboring gene uncharacterized LOC134479951 Neighboring gene uncharacterized LOC120093700 Neighboring gene uncharacterized LOC102549885 Neighboring gene EF-hand calcium binding domain 6 Neighboring gene uncharacterized LOC120093701

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    metallophosphoesterase domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001130569.1 → NP_001124041.1  metallophosphoesterase domain-containing protein 1

      See identical proteins and their annotated locations for NP_001124041.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473950
      UniProtKB/TrEMBL
      A6HTA6, D4A120
      Related
      ENSRNOP00000014720.5, ENSRNOT00000014720.8
      Conserved Domains (1) summary
      cd07379
      Location:91 → 303
      MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      116811841..116891789
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063263938.1 → XP_063120008.1  metallophosphoesterase domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A6HTA6, D4A120

    2. XM_063263939.1 → XP_063120009.1  metallophosphoesterase domain-containing protein 1 isoform X3

    3. XM_039079606.2 → XP_038935534.1  metallophosphoesterase domain-containing protein 1 isoform X2

      Conserved Domains (1) summary
      cl13995
      Location:91 → 137
      MPP_superfamily; metallophosphatase superfamily, metallophosphatase domain

    4. XM_039079608.2 → XP_038935536.1  metallophosphoesterase domain-containing protein 1 isoform X5

      Conserved Domains (1) summary
      cd07379
      Location:76 → 145
      MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain

    5. XM_039079605.2 → XP_038935533.1  metallophosphoesterase domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A6HTA6, D4A120
      Conserved Domains (1) summary
      cd07379
      Location:91 → 303
      MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain

    6. XM_017594993.3 → XP_017450482.1  metallophosphoesterase domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A6HTA6, D4A120
      Conserved Domains (1) summary
      cd07379
      Location:91 → 303
      MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain

    7. XM_017594994.3 → XP_017450483.1  metallophosphoesterase domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A6HTA6, D4A120
      Conserved Domains (1) summary
      cd07379
      Location:91 → 303
      MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain

    8. XM_063263940.1 → XP_063120010.1  metallophosphoesterase domain-containing protein 1 isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version

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