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    CG7966 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41610, updated on 26-Apr-2024

    Summary

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    Official Symbol
    CG7966provided by FlyBase
    Primary source
    FLYBASE:FBgn0038115
    Locus tag
    Dmel_CG7966
    See related
    AllianceGenome:FB:FBgn0038115
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG7966
    Summary
    Predicted to enable selenium binding activity. Is expressed in adult head. Orthologous to human SELENBP1 (selenium binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    87D10-87D10; 3-53 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13049398..13051453, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (8875120..8877175, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Heat shock protein 70 cognate 2 Neighboring gene uncharacterized protein Neighboring gene piccolo Neighboring gene long non-coding RNA:CR46530

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Decoupled differentiation of gene expression and coding sequence among Drosophila populations. Kohn MH, et al. Genes Genet Syst, 2008 Jun. PMID 18670138
    2. Evidence for the fixation of gene duplications by positive selection in Drosophila. Cardoso-Moreira M, et al. Genome Res, 2016 Jun. PMID 27197209, Free PMC Article
    3. Cross-phenotype association tests uncover genes mediating nutrient response in Drosophila. Nelson CS, et al. BMC Genomics, 2016 Nov 4. PMID 27809764, Free PMC Article
    4. The instantly released Drosophila immune proteome is infection-specific. Vierstraete E, et al. Biochem Biophys Res Commun, 2004 May 14. PMID 15094375
    5. Combining mapping and arraying: An approach to candidate gene identification. Wayne ML, et al. Proc Natl Acad Sci U S A, 2002 Nov 12. PMID 12415114, Free PMC Article

    See all (40) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables methanethiol oxidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables selenium binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG7966-PA
    NP_650256.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      13049398..13051453 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141999.3 → NP_650256.2  uncharacterized protein Dmel_CG7966 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650256.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5U137, Q9VFZ4
      Related
      FBpp0082183
      Conserved Domains (2) summary
      pfam05694
      Location:6 → 482
      SBP56; 56kDa selenium binding protein (SBP56)
      sd00042
      Location:321 → 358
      LVIVD; LVIVD repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7K537 Q7K537
    Q9VFZ4 Q9VFZ4

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