ZCCHC17 zinc finger CCHC-type containing 17 [Gallus gallus (chicken)] - Gene

Summary

Official Symbol: ZCCHC17provided by CGNC
Official Full Name: zinc finger CCHC-type containing 17provided by CGNC
Primary source: CGNC:383
See related: Ensembl:ENSGALG00010012933
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Annotation information: Annotation category: suggests misassembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 23

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	23	NC_052554.1 (952950..966042)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	23	NC_052595.1 (719523..732654)

Chromosome 23 - NC_052554.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in RNA stabilization	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: zinc finger CCHC domain-containing protein 17; nucleolar protein of 40 kDa

Names: PS1D; zinc finger, CCHC domain containing 17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_206978.2 → NP_996861.1 zinc finger CCHC domain-containing protein 17

See identical proteins and their annotated locations for NP_996861.1

Status: VALIDATED

Source sequence(s)

AY518184, BU109924

UniProtKB/TrEMBL

Q6R2T1

Related

ENSGALP00010018046.1, ENSGALT00010031043.1

Conserved Domains (1) summary

cd05686
Location:5 → 78

S1_pNO40; S1_pNO40: pNO40 , S1-like RNA-binding domain. pNO40 is a nucleolar protein of unknown function with an N-terminal S1 RNA binding domain, a CCHC type zinc finger, and clusters of basic amino acids representing a potential nucleolar targeting signal. ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

952950..966042

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GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

719523..732654

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046931913.1 → XP_046787869.1 nucleolar protein of 40 kDa isoform X1

UniProtKB/TrEMBL

Q6R2T1
XM_046931912.1 → XP_046787868.1 nucleolar protein of 40 kDa isoform X1

UniProtKB/TrEMBL

Q6R2T1